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Home / COVID19Dataset / Test4 / Embecovirus
Name Modified Size InfoDownloads / Week
Parent folder
Embecovirus_19.fasta 2020-01-28 31.9 kB
Embecovirus_20.fasta 2020-01-28 32.0 kB
Embecovirus_21.fasta 2020-01-28 31.9 kB
Embecovirus_22.fasta 2020-01-28 31.9 kB
Embecovirus_23.fasta 2020-01-28 32.2 kB
Embecovirus_24.fasta 2020-01-28 32.4 kB
Embecovirus_25.fasta 2020-01-28 32.4 kB
Embecovirus_26.fasta 2020-01-28 32.4 kB
Embecovirus_27.fasta 2020-01-28 32.2 kB
Embecovirus_28.fasta 2020-01-28 32.3 kB
Embecovirus_29.fasta 2020-01-28 32.4 kB
Embecovirus_30.fasta 2020-01-28 32.2 kB
Embecovirus_31.fasta 2020-01-28 32.4 kB
Embecovirus_32.fasta 2020-01-28 32.1 kB
Embecovirus_33.fasta 2020-01-28 32.2 kB
Embecovirus_34.fasta 2020-01-28 31.9 kB
Embecovirus_35.fasta 2020-01-28 31.9 kB
Embecovirus_36.fasta 2020-01-28 31.9 kB
Embecovirus_37.fasta 2020-01-28 31.9 kB
Embecovirus_38.fasta 2020-01-28 31.8 kB
Embecovirus_39.fasta 2020-01-28 32.2 kB
Embecovirus_40.fasta 2020-01-28 32.1 kB
Embecovirus_41.fasta 2020-01-28 32.0 kB
Embecovirus_42.fasta 2020-01-28 32.0 kB
Embecovirus_43.fasta 2020-01-28 32.0 kB
Embecovirus_44.fasta 2020-01-28 32.3 kB
Embecovirus_45.fasta 2020-01-28 31.9 kB
Embecovirus_46.fasta 2020-01-28 31.7 kB
Embecovirus_47.fasta 2020-01-28 30.8 kB
Embecovirus_48.fasta 2020-01-28 32.2 kB
Embecovirus_49.fasta 2020-01-28 32.2 kB
Embecovirus_1.fasta 2020-01-28 32.5 kB
Embecovirus_2.fasta 2020-01-28 32.2 kB
Embecovirus_3.fasta 2020-01-28 31.4 kB
Embecovirus_4.fasta 2020-01-28 32.0 kB
Embecovirus_5.fasta 2020-01-28 31.9 kB
Embecovirus_6.fasta 2020-01-28 31.9 kB
Embecovirus_7.fasta 2020-01-28 31.9 kB
Embecovirus_8.fasta 2020-01-28 31.9 kB
Embecovirus_9.fasta 2020-01-28 31.8 kB
Embecovirus_10.fasta 2020-01-28 31.9 kB
Embecovirus_11.fasta 2020-01-28 31.9 kB
Embecovirus_12.fasta 2020-01-28 31.9 kB
Embecovirus_13.fasta 2020-01-28 31.9 kB
Embecovirus_14.fasta 2020-01-28 31.9 kB
Embecovirus_15.fasta 2020-01-28 31.9 kB
Embecovirus_16.fasta 2020-01-28 32.0 kB
Embecovirus_17.fasta 2020-01-28 31.9 kB
Embecovirus_18.fasta 2020-01-28 31.9 kB
Totals: 49 Items   1.6 MB 0
1) The sequences obtained from NCBI and Virus-Host-DB are organized into folders Test1-Test6 (corresponding to the computational experiments in the paper), as fasta files.

2) The accession numbers of the 29 sequences from GISAID (28 COVID-19 virus sequences, and 1 betacoronavirus sequence RaTG13) are provided in the file 'GISAIDsequences.txt'.

3) Users can freely register on GISAID and search for/download the sequences using the provided accession numbers.

4) The RaTG13 sequence should be downloaded and placed in the:
 
a) Coronaviridae folder of Test2
b) Betacoronavirus folder of Test3a and Test3b
c) Sarbecovirus folder of Test4, Test5 and Test6

5) The 28 COVID-19 sequences from GISAID should be downloaded and placed in the COVID19 folder of Test5 and Test6.
Source: readme.txt, updated 2020-04-10