The miRSim tool can generate the synthetic RNA-Seq data in standard fastq/fasta format by utilizing the sequence-specific properties (i.e., seed and xseed (remaining part of the sequence after removing seed)). Additionally, miRSim also generates the ground truth in CSV format that provides information about genomic location, CIGAR string, sequence, and expression counts.

Features

  • miRNA
  • Synthetic RNA-Seq data generation
  • Seed
  • Next Generation Sequencing Data
  • piRNA
  • Paralogues

Project Samples

List of available options in miRSim miRSim at default options Error message in miRSim miRSim output with user defined arguments

Project Activity

See All Activity >

Follow miRSim

miRSim Web Site

Other Useful Business Software
$300 Free Credits to Build on Google Cloud Icon
$300 Free Credits to Build on Google Cloud

New customers can spin up VMs, build with AI, and query data at no cost.

Put your $300 in credit toward real workloads, then keep building with free monthly usage for 20+ products. No commitment and no charge until you upgrade.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of miRSim!

Additional Project Details

Registered

2021-03-12
Report inappropriate content