Mirroring co-evolving trees Icon

Mirroring co-evolving trees

Mirroring co-evolving trees in the light of their topologies

Add a Review
0 Downloads (This Week)
Last Update:
Download trees.tar.gz
Browse All Files


Determining the interaction partners among
protein/domain families poses hard computational problems,
in particular in the presence of paralogous proteins. Available
approaches aim to identify interaction partners among
protein/domain families through maximizing the similarity between
trimmed versions of their phylogenetic trees. Since maximization
of any natural similarity score is computationally difficult, many
approaches employ heuristics to evaluate the distance matrices
corresponding to the tree topologies in question. In this article, we
devise an efficient deterministic algorithm which directly maximizes
the similarity between two leaf labeled trees with edge lengths,
obtaining a score-optimal alignment of the two trees in question.

Mirroring co-evolving trees Web Site



Other Useful Business Software

Is your app at the top of its class? Icon

Recognized in the industry for leading IaaS, PaaS, and SaaS. Start building your next intelligent app today with a $200 credit.

Is your app at the top of its class? Icon
Use the tools and open source technologies you already know and trust, because Azure supports a broad selection of operating systems, programming languages, frameworks, databases, and devices. Azure offers hybrid consistency everywhere: in application development, management and security, identity management, and across the data platform.
Write a Review

User Reviews

Be the first to post a review of Mirroring co-evolving trees!

Additional Project Details



Thanks for helping keep SourceForge clean.

Screenshot instructions:
Red Hat Linux   Ubuntu

Click URL instructions:
Right-click on ad, choose "Copy Link", then paste here →
(This may not be possible with some types of ads)

More information about our ad policies

Briefly describe the problem (required):

Upload screenshot of ad (required):
Select a file, or drag & drop file here.

Please provide the ad click URL, if possible:

Get latest updates about Open Source Projects, Conferences and News.

No, thanks