mimicree2 Files

Genome-wide forward simulations of evolving populations

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Name	Modified	Size	InfoDownloads / Week
Parent folder
population-size	2018-06-25	51 Bytes	0
make_random_selected.py	2018-06-25	928 Bytes	0
make_haps_from_fasta.py	2018-06-25	1.0 kB	0
Totals: 3 Items		2.0 kB	0

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SimulaTE
SimulaTE allows to simulate arbitrary complex landscapes of transposable elements (TEs). Additionally reads may be simulated using the genomes of all indivdiuals in the population as template. Reads may be simulated using different sequencing technologies (PacBio, Illumina paired-ends) and...
popoolation2
PoPoolation2 allows to compare allele frequencies for SNPs between two or more populations and to identify significant differences. PoPoolation2 requires next generation sequencing data of pooled genomic DNA (Pool-Seq). It may be used for measuring differentiation between populations, for genome...
LDhelmet
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diCal2
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As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is...

mimicree2 Files

Genome-wide forward simulations of evolving populations

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