A tool to compare microbial genomes by their sequence fragments. We redistributed the Bioperl package in our software for convenience purpose. The latest Bioperl package can be downloaded from: http://www.bioperl.org.
System Requirement:
Java Runtime Environment 1.6.0 or above;
Perl 5.0 or above

If you have any difficulties to run this tool, just let me know by chenh12@nyumc.org.

Features

  • Compare two groups of genomes to find non-matching sequences between them
  • Find repeated sequences inside one genome

Project Samples

Project Activity

See All Activity >

Follow microbial genome comparison

microbial genome comparison Web Site

Other Useful Business Software
MongoDB Atlas runs apps anywhere Icon
MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of microbial genome comparison!

Additional Project Details

Registered

2013-08-29