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MaxBin

An automatic tool for binning metagenomics sequences

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Download MaxBin-2.2.1.tar.gz
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Description

MaxBin is a software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users could understand the underlying bins (genomes) of the microbes in their metagenomes by simply providing assembled metagenomic sequences and the reads coverage information or sequencing reads. For users' convenience MaxBin will report genome-related statistics, including estimated completeness, GC content and genome size in the binning summary page. Users could use MEGAN or similar software on MaxBin bins to find out the taxonomy of each bin after the binning process is finished.

The most current version is 2.2.

MaxBin was published on Microbiome journal (2:26)! Please cite the Microbiome paper if you use MaxBin in your work.

More information can be found at the official MaxBin website:
http://downloads.jbei.org/data/MaxBin.html to

MaxBin Web Site

Categories

Bio-Informatics

License

BSD License

Features

  • Metagenomics Binning

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Additional Project Details

Intended Audience

Healthcare Industry

Programming Language

Perl, C++

Registered

2014-05-02

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