Download Latest Version LymAnalyzer_cmd_1.2.2.jar (10.8 MB)
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Home / Testfiles
Name Modified Size InfoDownloads / Week
Parent folder
Igtest.fastq 2015-06-16 81.1 MB
tcrTest.fastq 2015-06-16 43.4 MB
Totals: 2 Items   124.5 MB 0
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LymAnalyzer - analysis TCR/IG repertoire from high-throughput sequencing reads
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System requirements
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  - Java 1.7 or above:

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Example Usage
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There is a command line version and a graphic user interface version of LymAnalyzer, respectively namely:

LymAnalyzer_cmd_1.0.jar

LymAnalyzer_gui_1.0.jar

1. Download LymAnalyzer_cmd_1.0.jar or LymAnalyzer_gui_1.0.jar.

2. Download the test data in Testifies folder.

3. —- For LymAnalyzer_gui_1.0.jar:

      simply click it or run with command “java -jar LymAnalyzer_gui_1.0.jar”. A window will pop out, fill in the information you need and click “Run”.

   —- For LymAnalyzer_cmd_1.0:

      use the command “java -jar -Xmx4g LymAnalyzer_cmd_1.0.jar /InputFilePath /OutPutFolder TCRB hs Name Yes No”.


For further information about the advanced usage of the parameters, please read User_Guide.pdf.
Source: README, updated 2015-06-19