LociMapViz - multi loci visualization

Brought to you by: skblaz

Downloads: 0 This Week

Last Update: 2016-01-08

Get an email when there's a new version of LociMapViz - multi loci visualization

Software for visualization of point variability in pairwise sequence alignment FASTA format. Featuring GUI interface, this simple application enables insight into variation of nucleic and amino acids on specific loci.

Current 1.1 version supports amino and nucleic acid alignments. There are 2 variations of this software. One is CLI based and the other one is GUI based. Read corresponding README files in order to get familiar with the software.

Extract files and run the jar file!

Project Samples

Main screen

Main View with output

Using editor panel

CLI view.

Project Activity

See All Activity >

Follow LociMapViz - multi loci visualization

LociMapViz - multi loci visualization Web Site

Other Useful Business Software

Go from Code to Production URL in Seconds Icon

Go from Code to Production URL in Seconds

Cloud Run deploys apps in any language instantly. Scales to zero. Pay only when code runs.

Skip the Kubernetes configs. Cloud Run handles HTTPS, scaling, and infrastructure automatically. Two million requests free per month.

Try it free

Rate This Project

Login To Rate This Project

User Reviews

Be the first to post a review of LociMapViz - multi loci visualization!

Additional Project Details

Registered

2015-11-05

Report inappropriate content

Our Free Plans just got better! | Auth0

With up to 25k MAUs and unlimited Okta connections, our Free Plan lets you focus on what you do best—building great apps.

You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.

Try free now

Recommended Projects

RasTop
RasTop is a molecular graphics program intended for the visualisation of proteins, nucleic acids and small molecules based on the popular Rasmol software. The program is aimed at the rapid visualization and analysis of molecules.
CodonW
CodonW is a programme designed to simplify the Multivariate analysis (correspondence analysis) of codon and amino acid usage. It was written in ANSI compliant C. See the README file for more information.
NAMOT-Nucleic Acid MOdelling Tool
The Nucleic Acid Modeling Tool(NAMOT) is a program to allow users to manipulate molecular models of nucleic acids based on a set of reduced co-ordinates developed at Los Alamos National Laboratory and the Max Planck Institute for Biophysical Chemistry.
provean
Predicting the functional effect of protein sequence variations
MELTING
MELTING is a software to compute, for a nucleic acid duplex, the enthalpy and the entropy of the helix coil transition and then the melting temperature. Four types of hybridization are possible : DNA/DNA, RNA/RNA, RNA/DNA and mRNA/RNA.