This code implements the MCMC and ordinary differential equation (ODE) model described in [1]. The core MCMC and ODE code is implemented in C/C++, and is wrapped with an R front end. This is not an R-package (although there are plans to extend the code and eventually make it into an R-package).
Please read the PDF file supplied for further instructions on how to use this code.
[1] HBV vaccination and PMTCT as elimination tools in the presence of HIV: insights from a clinical cohort and dynamic model
https://bmcmedicine.biomedcentral.com/articles/10.1186/s12916-019-1269-x
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