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GRASP is a gene annotation tool for metagenomic studies. GRASP assembles the fragmented short-peptides, which are called from the NGS reads, and aligns the assembled contigs to the query reference protein. GRASP achieves much higher sensitivity than BLASTP for gene annotation purpose.
If you found GRASP useful for your projects, please cite:
Zhong, C., Yang, Y., and Yooseph, S. GRASP: Guided Reference-based Assembly for Short Peptides, Manuscript in preparation
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