GenomeScanner

The "Genome Scanner" is a program written to display tag data obtained from ChIP-Seq and RNA-Seq experiments. Programs already exist to do this job, but the research group here at NYU needed to explore different methods for scoring tag peaks and to visualize the results. "Genome Scanner" (GS) was written to be light-weight, fast and easily adapted to varied display tasks. The package also contains software to plot KM survival curves for patients based on gene expression data from tumor biopsies.