FL4Health Files

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/VectorInstitute/FL4Health/pull/267
• Modify LR Scheduler + Test by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/268
• try except block for dataset.json in case nnunet_raw is unavailable by @scarere in https://github.com/VectorInstitute/FL4Health/pull/266
• Bump waitress from 3.0.0 to 3.0.1 by @dependabot in https://github.com/VectorInstitute/FL4Health/pull/269
• Address Shawns CR on previous PR by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/270
• Elapsed time was backwards by @scarere in https://github.com/VectorInstitute/FL4Health/pull/271
• modified progress bar formatting to inherit from flwr formatting by @scarere in https://github.com/VectorInstitute/FL4Health/pull/273
• Modify curr step of LR Scheduler to start at 0 instead of 1 by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/274
• Fix typing on assertion for ReportsManager by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/276
• Changes to Support Expanded Experimentation with FedDG-GA by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/252
• Bump pypa/gh-action-pypi-publish from 1.10.3 to 1.11.0 by @dependabot in https://github.com/VectorInstitute/FL4Health/pull/277
• Adaptive and Fed DG-GA PFL Experimentation by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/251
• Add More Logging To FedDG-GA Strategy by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/272
• Updating the FLamby installation instructions to reflect some changes on their end. by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/275
• Lowercasing torch device variables throughout library when not global by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/279
• Pinning a source of randomness in server-side aggregation. by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/278
• First pass at optionally shutting down server (and remaining clients) on failures by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/280
• Adding a touch of logging for checkpointing errors by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/281
• Bump pypa/gh-action-pypi-publish from 1.11.0 to 1.12.2 by @dependabot in https://github.com/VectorInstitute/FL4Health/pull/284
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/VectorInstitute/FL4Health/pull/282
• More Masked Layers for FedPM by @yc7z in https://github.com/VectorInstitute/FL4Health/pull/283
• Fixing infinite base server test by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/289
• Moving relevant files to use the future annotations import for 'in-class' return values by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/286
• Modified some of the reporting keys and overhauled the wandb reporter by @scarere in https://github.com/VectorInstitute/FL4Health/pull/288
• Small update to FLamby install instructions to avoid cluster failures. by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/287
• Bump aiohttp from 3.10.3 to 3.10.11 by @dependabot in https://github.com/VectorInstitute/FL4Health/pull/290
• Name change for server folder to servers by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/292
• Add resume wandb reporter by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/293
• Update deep mmd client and loss implementation by @sanaAyrml in https://github.com/VectorInstitute/FL4Health/pull/285
• Custom nnunet trainer by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/296
• Bump mlflow from 2.15.1 to 2.16.0 by @dependabot in https://github.com/VectorInstitute/FL4Health/pull/297
• Bump pypa/gh-action-pypi-publish from 1.12.2 to 1.12.3 by @dependabot in https://github.com/VectorInstitute/FL4Health/pull/302
• Converting to masked layers bug fix by @yc7z in https://github.com/VectorInstitute/FL4Health/pull/303
• Server storing FL configs and Consolidating Base Server Functionality by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/294
• Add max_num_validation_steps member of config and client and related … by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/304
• Nnunet amp integration by @jewelltaylor in https://github.com/VectorInstitute/FL4Health/pull/305
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/VectorInstitute/FL4Health/pull/306
• Upgrading peotry lock to include jinja update. by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/308
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/VectorInstitute/FL4Health/pull/310
• Consolidating model and state checkpointing on the client and server sides. by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/298
• Mypy Typing Migration and Some typo fixes by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/299
• A few fixes to our Examples by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/300
• Keras vulnerability ignore until there is a fix by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/312
• [CI] Add github action for creating Github release by @nerdai in https://github.com/VectorInstitute/FL4Health/pull/311
• Small download script changes for RxRx1 by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/315
• Smoke test bug fix for Andrei with the state checkpointers by @emersodb in https://github.com/VectorInstitute/FL4Health/pull/316
• [CU-868byqhk5] Fix smoke tests for GPU by @nerdai in https://github.com/VectorInstitute/FL4Health/pull/314
• Pin PyArrow to v^17.0 by @nerdai in https://github.com/VectorInstitute/FL4Health/pull/317
• Rxrx1 research running scripts by @sanaAyrml in https://github.com/VectorInstitute/FL4Health/pull/309
• Move assert statements out of run_smoke_test and into the actual test (for graceful shutdown in case of failure) by @nerdai in https://github.com/VectorInstitute/FL4Health/pull/318
• Add early stop module by @sanaAyrml in https://github.com/VectorInstitute/FL4Health/pull/301
• Bump pypa/gh-action-pypi-publish from 1.12.3 to 1.12.4 by @dependabot in https://github.com/VectorInstitute/FL4Health/pull/324

New Contributors

• @nerdai made their first contribution in https://github.com/VectorInstitute/FL4Health/pull/311

Full Changelog: https://github.com/VectorInstitute/FL4Health/compare/v0.2.2...v0.3.0