ExprEssence Plugin for Cytoscape

Brought to you by: gwarsow

Downloads: 0 This Week

Last Update: 2015-07-24

Get an email when there's a new version of ExprEssence Plugin for Cytoscape

ExprEssence uses differential data (e.g. gene expression data) to highlight those links of a network, across which the largest changes can be observed comparing two experiments. * Please cite http://www.biomedcentral.com/1752-0509/4/164 *

Tutorial: http://www.ibima.med.uni-rostock.de/warsow/ExprEssence.shtml

Project Activity

See All Activity >

License

GNU Library or Lesser General Public License version 2.0 (LGPLv2)

Follow ExprEssence Plugin for Cytoscape

ExprEssence Plugin for Cytoscape Web Site

Other Useful Business Software

$300 in Free Credit Towards Top Cloud Services Icon

$300 in Free Credit Towards Top Cloud Services

Build VMs, containers, AI, databases, storage—all in one place.

Start your project in minutes. After credits run out, 20+ products include free monthly usage. Only pay when you're ready to scale.

Get Started

Rate This Project

Login To Rate This Project

User Reviews

Be the first to post a review of ExprEssence Plugin for Cytoscape!

Additional Project Details

Registered

2010-06-14

Report inappropriate content

$300 in Free Credit Towards Top Cloud Services

Build VMs, containers, AI, databases, storage—all in one place.

Start your project in minutes. After credits run out, 20+ products include free monthly usage. Only pay when you're ready to scale.

Get Started

Recommended Projects

Scanpy
Single-cell analysis in Python
SysGenSIM
SysGenSIM is a bioinformatics toolbox to create artificial gene expression datasets by simulating Systems Genetics experiments.
HeatmapGenerator
HeatmapGenerator is a graphical user interface software program written in C++, R, and OpenGL to create customized gene expression heatmaps from RNA-seq and microarray data in medical research. HeatmapGenerator can also be used to make heatmaps in a variety of other non-medical fields. HeatmapGenerator is peer-reviewed published software (http://www.scfbm.org/content/9/1/30). Please cite: [Khomtchouk et al.: "HeatmapGenerator: High performance RNAseq and microarray visualization software suite to examine differential gene expression levels using an R and C++ hybrid computational pipeline." Source Code for Biology and Medicine, 2014 9:30] HeatmapGenerator source code is available at: https://github.com/Bohdan-Khomtchouk/HeatmapGenerator Bohdan Khomtchouk wishes to acknowledge the support of the Department of Defense (DoD) through the National Defense Science & Engineering Graduate Fellowship (NDSEG) Program. HeatmapGenerator is released under the GNU GPL.
mged
Microarray Gene Expression Database Group and OMG Gene Expression Standard (MAGE)
CNV Workshop
CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74