EMBOSS Suite

EMBOSS is a dynamic and comprehensive Open Source package for bioinformatics (DNA and protein sequence analysis, protein structure, phylogenetics, etc.). EMBOSS is written in C, also compatible with C++, and has a separate Java interface (Jemboss)

Features

Sequence analysis
Next generation sequencing
Bioinformatics

Project Activity

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License

GNU General Public License version 2.0 (GPLv2), GNU Library or Lesser General Public License version 2.0 (LGPLv2)

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plessy Posted 2009-09-30

Working on 454 run with long linkers and random insert orientation, only EMBOSS could help me to produce a clean FASTQ file with orientation corrected and linkers removed. Update: and now it supports SAM format, which is really useful.

Additional Project Details

Operating Systems

BSD, Cygwin, Desktop Operating Systems, HP-UX, Linux, Mac, Server Operating Systems, Solaris, Windows

Languages

English

Intended Audience

Developers, End Users/Desktop, Healthcare Industry, Science/Research

User Interface

Command-line, Java Swing, Web-based

Programming Language

C, C++, Java

Related Categories

C++ Bio-Informatics Software, C Bio-Informatics Software, Java Bio-Informatics Software

Registered

2003-10-29

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