DeNovoGear

DeNovoGear is a program to detect denovo mutations using sequencing data.
The methods behind DeNovoGear are described in this publication,
http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html

The production version of the code(updated more frequently) can be found here,
https://github.com/denovogear/denovogear

The releases of major and minor versions of the code are this Sourceforge page.

Features

Detect denovo point mutations amongst trios.
Detect denovo indels amongst trios.
Detect variation amongst paired samples.
Parental phasing of mutations.

Project Samples

Denovo insertion in a trio called with DeNovoGear.

Denovo deletion in a trio called with DeNovoGear.

Paired sample denovo call made with DeNovoGear.

Denovo SNP in a trio called with DeNovoGear.

Project Activity

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