DecGPU: CUDA-based Error Correction download

DecGPU (Distributed Error correction on GPUs) is a parallel and distributed error correction algorithm for large-scale short read assembly. It is implemented using CUDA C++ and MPI, running on a GPU cluster.

Project Activity

See All Activity >

License

Apache License V2.0, GNU General Public License version 2.0 (GPLv2)

Follow DecGPU: CUDA-based Error Correction

DecGPU: CUDA-based Error Correction Web Site

Other Useful Business Software

Cloud-based help desk software with ServoDesk

Full access to Enterprise features. No credit card required.

What if You Could Automate 90% of Your Repetitive Tasks in Under 30 Days? At ServoDesk, we help businesses like yours automate operations with AI, allowing you to cut service times in half and increase productivity by 25% - without hiring more staff.

Try ServoDesk for free

Rate This Project

User Reviews

Be the first to post a review of DecGPU: CUDA-based Error Correction!

Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Developers, Healthcare Industry, Science/Research

User Interface

Console/Terminal

Programming Language

C++

Related Categories

C++ Bio-Informatics Software

Registered

2010-07-05

Similar Business Software

Galaxy

Galaxy is an open source, web-based platform for data-intensive biomedical research. If you are new to Galaxy start here or consult our help resources. You can install your own Galaxy by following the tutorial and choosing from thousands of tools from the tool shed. This instance of Galaxy is...

See Software
Geneious

Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype...

See Software
SnapGene

Accurately design and simulate cloning procedures. Test complicated projects, catch errors before they happen, and obtain the right constructs the first time. Cloning is easier when you can see what you are doing. The intuitive interface offers you unparalleled visibility into your work,...

See Software
Microsoft Genomics

Instead of managing your own data centers, take advantage of Microsoft's scale and experience in running exabyte-scale workloads. Because Microsoft Genomics is on Azure, you have the performance and scalability of a world-class supercomputing center, on demand in the cloud. Take advantage of a...

See Software
OmicsBox

OmicsBox is a leading bioinformatics solution that offers end-to-end data analysis of genomes, transcriptomes, metagenomes, and genetic variation studies. The application is used by top private and public research institutions worldwide and allows researchers to easily process large and complex...

See Software
Cufflinks

Cufflinks assemble transcripts, estimate their abundances and test for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these...

See Software