DBG2OLC

DBG2OLC: Efficient Assembly of Large Genomes Using the Compressed Overlap Graph

The source code can be found in the code page.
To compile, go to the directory with all the code files, and use: g++ -o DBG2OLC -O3 *.cpp

Project Activity

See All Activity >

Follow DBG2OLC

DBG2OLC Web Site

Other Useful Business Software

Custom VMs From 1 to 96 vCPUs With 99.95% Uptime

General-purpose, compute-optimized, or GPU/TPU-accelerated. Built to your exact specs.

Live migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.

Start Free

Rate This Project

User Reviews

Be the first to post a review of DBG2OLC!

Additional Project Details

Registered

2015-08-03

Report inappropriate content

$300 Free Credits to Build on Google Cloud

New customers can spin up VMs, build with AI, and query data at no cost.

Put your $300 in credit toward real workloads, then keep building with free monthly usage for 20+ products. No commitment and no charge until you upgrade.

Start Free

Recommended Projects

GFinisher
genome assembler finisher, gap, gap close, sort contig
PCT
Set of Ant tasks to compile Progress code using XREF, dump/load Progress databases, and so on. Source code and releases can now be found at https://github.com/Riverside-Software/pct
SOAPdenovo2
Large-size genome de-novo assembler
XORRO: Rapid Paired-End Read Overlapper
XORRO is an extremely efficient paired-read overlap program for use with Illumina sequencing.
BASE
a fast and accurate de novo genome assembler for longer NGS reads