CUSHAW2: Parallel Gapped Read Alignment Files

One of the leading short-/long-read aligner to large genomes

Status: Beta

Brought to you by: nkcslyc

The interactive file manager requires Javascript. Please enable it or use sftp or scp.
You may still browse the files here.

Name	Modified	Size	InfoDownloads / Week
Parent folder
rat(rn5)	2012-06-14		0
mouse(mm10)	2012-06-14		0
human(hg19)	2012-06-13		0
cushaw2_index.tar.gz	2013-03-07	31.7 kB	0
Totals: 4 Items		31.7 kB	0

Other Useful Business Software

Our Free Plans just got better! | Auth0

With up to 25k MAUs and unlimited Okta connections, our Free Plan lets you focus on what you do best—building great apps.

You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.

Try free now

Crowdtesting That Delivers | Testeum

Unfixed bugs delaying your launch? Test with real users globally – check it out for free, results in days.

Testeum connects your software, app, or website to a worldwide network of testers, delivering detailed feedback in under 48 hours. Ensure functionality and refine UX on real devices, all at a fraction of traditional costs. Trusted by startups and enterprises alike, our platform streamlines quality assurance with actionable insights. Click to perfect your product now.

Click to perfect your product now.

Recommended Projects

CUSHAW: CUDA-based Short Read Alignment
the first aligner introducing a complete paired-end alignment on GPUs
CUSHAW3: Accurate Short-read Alignment
CUSHAW3 is an open-source parallelized, sensitive and accurate short-read aligner. This aligner proposes a general approach to properly aligning both easy and hard reads to large genomes such as the human genome. Perform evaluation on alignment quality reals that CUSHAW3 consistently outperforms CUSHAW2, BWA-MEM, Bowtie2 and GEM in terms of single-end and paired-end alignment. Furthermore, our aligner has demonstrated better paired-end alignment performance than Novalign3 for short-reads with high error rates.
BarraCUDA Fast Short Read Aligner
Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
Anime4K
Anime4K is an open-source, high-quality anime upscaling algorithm

CUSHAW2: Parallel Gapped Read Alignment Files

One of the leading short-/long-read aligner to large genomes

Get an email when there's a new version of CUSHAW2: Parallel Gapped Read Alignment