CUSHAW2: Parallel Gapped Read Alignment Files

One of the leading short-/long-read aligner to large genomes

Status: Beta

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Name	Modified	InfoDownloads / Week
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Illumina-like	2013-03-15	0
454-like	2013-03-15	0
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CUSHAW3 is an open-source parallelized, sensitive and accurate short-read aligner. This aligner proposes a general approach to properly aligning both easy and hard reads to large genomes such as the human genome. Perform evaluation on alignment quality reals that CUSHAW3 consistently outperforms CUSHAW2, BWA-MEM, Bowtie2 and GEM in terms of single-end and paired-end alignment. Furthermore, our aligner has demonstrated better paired-end alignment performance than Novalign3 for short-reads with high error rates.
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CUSHAW2: Parallel Gapped Read Alignment Files

One of the leading short-/long-read aligner to large genomes

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