Crosscut: Multiple genome representation

Crosscut is a set of high-quality and efficient modules handling NGS datasets in a population.

Chronos is a highly sensitive and efficient multiple whole genome aligner in a population.
Apollo is a structural variant caller in a population.
Poseidon is a highly sensitive and efficient taxonomy classifier.

All algorithms are developed since Feb. 6. 2015 by Euncheon Lim in Prof. Weigel's Lab in Max-Planck Institute for Developmental Biology.