An integrated bioinformatics toolkit for analysis of ChIPseq data from the Illumina DNA sequencing platform. Includes filtering, quality control, simulation, peakfinding, visualization, and comparison of samples.

Features

  • Genome scale restriction enzyme tool
  • Simulated data files for Illumina paired-end reads

Project Samples

Genome Scanner visualization of ChIP and RNAseq data HaeIII fragments of mouse chr19, bed file viewed on UCSC

Project Activity

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Categories

Bio-Informatics

License

GNU Library or Lesser General Public License version 2.0 (LGPLv2)

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ChIPseqTools Web Site

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Additional Project Details

Intended Audience

Science/Research

Programming Language

Java, Perl

Related Categories

Perl Bio-Informatics Software, Java Bio-Informatics Software

Registered

2010-11-12
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