Download Latest Version
BBMap_39.30.tar.gz (13.4 MB)
Get an email when there's a new version of BBMap
| Name | Modified | Size | Downloads / Week |
|---|---|---|---|
| Parent folder | |||
| BBTools_List.txt | 2025-05-14 | 22.9 kB | |
| README.txt | 2025-05-07 | 960 Bytes | |
| SILVA_LICENSE.txt | 2025-05-07 | 449 Bytes | |
| all_prok_16S_best.fa.gz | 2025-05-06 | 43.6 MB | |
| all_euk_18S_best.fa.gz | 2025-05-06 | 14.7 MB | |
| tree.taxtree.gz | 2025-05-05 | 37.0 MB | |
| refseqA48_with_ribo.spectra.gz | 2025-05-05 | 245.5 MB | |
| Totals: 7 Items | 340.9 MB | 7 | |
This directory contains some resources too big to include with the main BBTools download. tree.taxtree.gz Used by some programs that use taxonomy. Contains all of the NCBI numeric TaxIDs and node names. Can be dropped into the /resources/ directory. Needs to be updated periodically. refseqA48_with_ribo.spectra.gz Used by QuickClade (and programs that use it indirectly, like GradeBins). Contains trimer, tetramer, and pentamer counts of RefSeq genomes. Can be dropped into /resources/ all_prok_16S_best.fa.gz Best single representative 16S sequences of prokaryotes; one per NCBI TaxID. Pulled from Silva 138 and gene-calling on RefSeq genomes. Does NOT include mito/chloro 16S. all_euk_18S_best.fa.gz Best single representative 18S sequences of eukaryotes; one per NCBI TaxID. Pulled from Silva 138 and gene-calling on RefSeq genomes. Does NOT include mito/chloro 16S. SILVA_LICENSE.txt Provided because some of the SSU data comes from Silva.