ALEXA-Seq is a method for using massively parallel paired-end transcriptome sequencing for 'alternative expression analysis'.

Features

  • Alternative expression analysis
  • WTSS/RNA-Seq library quality assessment
  • Gene expression analysis
  • Novel transcript discovery
  • Visualization of sequence feature expression, differential expression and alternative expression

Project Activity

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Categories

Bio-Informatics

License

GNU General Public License version 3.0 (GPLv3)

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ALEXA-Seq Web Site

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Additional Project Details

Operating Systems

Linux

Intended Audience

Science/Research

User Interface

Console/Terminal

Programming Language

Unix Shell, Perl, S/R

Database Environment

Perl DBI/DBD, MySQL, Berkeley/Sleepycat/Gdbm (DBM)

Related Categories

Unix Shell Bio-Informatics Software, Perl Bio-Informatics Software, S/R Bio-Informatics Software

Registered

2010-04-02
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