ALEXA-Seq

ALEXA-Seq is a method for using massively parallel paired-end transcriptome sequencing for 'alternative expression analysis'.

Features

Alternative expression analysis
WTSS/RNA-Seq library quality assessment
Gene expression analysis
Novel transcript discovery
Visualization of sequence feature expression, differential expression and alternative expression

Project Activity

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License

GNU General Public License version 3.0 (GPLv3)

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ALEXA-Seq Web Site

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Additional Project Details

Operating Systems

Linux

Intended Audience

Science/Research

User Interface

Console/Terminal

Programming Language

Perl, S/R, Unix Shell

Database Environment

Berkeley/Sleepycat/Gdbm (DBM), MySQL, Perl DBI/DBD

Related Categories

Unix Shell Bio-Informatics Software, Perl Bio-Informatics Software, S/R Bio-Informatics Software

Registered

2010-04-02

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