AIRVF was developed to increase accuracy of low-frequency variant calling. Our zip file contains programs for both Window and Linux. AIRVF demonstrated higher precision and sensitivity by accurately detecting SNVs with low VAF in Ion Torrent data. If you cannot install Torrent Suite in non-Ubuntu Linux servers, the AIRVF and VarScan2 pipeline can be a good alternative. But combination of SNVs from VarScan2 and indels from Torrent Variant Caller-Ion Reporter will demonstrate the best performance. It's fast.

Features

  • somatic mutation
  • low VAF
  • Torrent Variant Caller
  • VarScan2
  • Ion Reporter
  • LoFreq

Project Samples

airvf Screenshot 1

Project Activity

See All Activity >

Follow airvf

airvf Web Site

Other Useful Business Software
Custom VMs From 1 to 96 vCPUs With 99.95% Uptime Icon
Custom VMs From 1 to 96 vCPUs With 99.95% Uptime

General-purpose, compute-optimized, or GPU/TPU-accelerated. Built to your exact specs.

Live migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.
Try Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of airvf!

Additional Project Details

Registered

2016-07-31
Report inappropriate content