[wgs-assembler-users] Empty ovlstore in CA8.3 run

[Loke K. K. <kk...@uk...>]

Hi,

       My assembly with CA 8.3 is always stopped at the overlapstore
building step. I checked with the asm.ovlStore.err, it just show the help
screen of a command fail to look for its input file.

       I check my 1-overlapper folder, the .sh file is not running as there
is no SGE_TASK_ID but my run is in local which I have set all rungrid=0.

       Can anyone advise what is wrong with my settings?

Regards,
KK

-- 
Loke Kok Keong
PhD Candidate of Computational Systems Biology
Centre for Bioinformatics Research (CBR)
Institute of Systems Biology (INBIOSIS)
Universiti Kebangsaan Malaysia (UKM)
43600 Bangi
Selangor
Malaysia
HP: 0102266792