Re: [vmtk-users] vmtk windows installation
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Re: [vmtk-users] vmtk windows installation
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From: Luca A. <luc...@or...> - 2011-09-29 07:34:17
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Hi Raul, great news then. Can you try entering the Python console and writing import vtk from vmtk import vmtkscripts and see if it fails. Luca On Sep 27, 2011, at 7:34 PM, Anton, Raul wrote: > Hi Luca, > > Thanks! it worked and I could install vmtk and compile in visual studio....I think that the last step is to set the environmental variables. I have installed Python, VTK, VMTK and ITK in c: and not in c:/Programfiles.... I set the environmental variables according to: > In PATH I add: > ;C:\VTK\bin;C:\ITK\bin;C:\VMTK\bin;C:\Python25 > Then I create a new one > PYTHONPATH and edit writing: > c:\VTK\lib\site-packages;c:\VMTK\lib\vmtk > Then I moved to the console I write vmtk-exe.py and I get the following error: any hint?? Thanks raul > > > C:\VMTK\bin>dir > Volume in drive C is System > Volume Serial Number is D24F-DFB8 > Directory of C:\VMTK\bin > 09/27/2011 06:55 PM <DIR> . > 09/27/2011 06:55 PM <DIR> .. > 09/27/2011 06:45 PM 2,388 vmtk-exe.py > 09/27/2011 06:47 PM 13,312 vtkvmtkCommon.dll > 09/27/2011 06:47 PM 13,824 vtkvmtkCommonPythonD.dll > 09/27/2011 06:49 PM 856,064 vtkvmtkComputationalGeometry.dll > 09/27/2011 06:50 PM 389,120 vtkvmtkComputationalGeometryPythonD.dll > 09/27/2011 06:50 PM 442,368 vtkvmtkDifferentialGeometry.dll > 09/27/2011 06:51 PM 204,800 vtkvmtkDifferentialGeometryPythonD.dll > 09/27/2011 06:50 PM 135,168 vtkvmtkIO.dll > 09/27/2011 06:53 PM 28,160 vtkvmtkIOPythonD.dll > 09/27/2011 06:49 PM 3,317,760 vtkvmtkITK.dll > 09/27/2011 06:49 PM 258,048 vtkvmtkITKPythonD.dll > 09/27/2011 06:52 PM 729,088 vtkvmtkMisc.dll > 09/27/2011 06:53 PM 155,648 vtkvmtkMiscPythonD.dll > 09/27/2011 06:52 PM 1,355,776 vtkvmtkSegmentation.dll > 09/27/2011 06:54 PM 319,488 vtkvmtkSegmentationPythonD.dll > 15 File(s) 8,221,012 bytes > 2 Dir(s) 69,364,473,856 bytes free > C:\VMTK\bin>vmtk-exe.py > Traceback (most recent call last): > File "C:\VMTK\bin\vmtk-exe.py", line 4, in <module> > from vmtk import pypes > ImportError: No module named vmtk > > ________________________________________ > From: Luca Antiga [luc...@or...] > Sent: Tuesday, September 27, 2011 12:40 PM > To: Anton, Raul > Cc: vmt...@li... > Subject: Re: [vmtk-users] vmtk windows installation > > Hi Anton, > working with git is not strictly required, you can always go back to the download button and get the latest source. It's just a bit more involved. > > The reason why you might get a permission denied could be that the git protocol port is blocked. > > Try with the following > > git clone https://github.com/lantiga/vmtk.git > > It goes through https, you should be able to get it this way. > > Hope this helps > > > Luca > > > On Sep 26, 2011, at 9:51 AM, Anton, Raul wrote: > >> Hi Luca, >> >> In order to do what you are telling me, I have to use a git program. In two previous messages I told you that I downloaded vmtk from https://github.com/lantiga/vmtk but I did without using a git software. Then, you told me to write git pull origin master...Then I realized that I have to work with a git. I downloaded a git software: >> http://code.google.com/p/msysgit/downloads/detail?name=Git-1.7.6-preview20110708.exe&can=2&q= >> but there was no connection. I contacted the computer support at my university and this morning, they say that I should be able to do...when cloning I get an error message like: >> Permission denied (publickey). >> fatal: The remote end hung up unexpectedly >> Any hints??? >> Thanks!!raúl >> >> -----Original Message----- >> From: Luca Antiga [mailto:luc...@gm...] >> Sent: miércoles, 21 de septiembre de 2011 13:30 >> To: Anton, Raul >> Cc: vmt...@li... >> Subject: Re: [vmtk-users] vmtk windows installation >> >> Ok, great, at least you have a clean source code and you can keep up with fixes. >> >> I just pushed a workaround that should solve your issue. >> >> Try updating your source this way: >> >> cd vmtk (your vmtk source directory generated by the git clone command) >> git pull origin master >> >> Then build again. >> >> Luca >> >> >> On Sep 21, 2011, at 1:26 PM, Anton, Raul wrote: >> >>> Hi Luca, >>> I have downloaded it from: >>> https://github.com/lantiga/vmtk >>> But I have still the same error: >>> Error 403 fatal error C1083: Cannot open include file: 'sys/time.h': No such file or directory d:\vmtk\lantiga-vmtk-8942043\vtkvmtk\utilities\stellar_1.0\src\Starbase.h 9 >>> Thanks! raul >>> >>> -----Original Message----- >>> From: Luca Antiga [mailto:luc...@gm...] >>> Sent: Wednesday, September 21, 2011 12:47 PM >>> To: Anton, Raul >>> Cc: vmt...@li... >>> Subject: Re: [vmtk-users] vmtk windows installation >>> >>> Ok, this is the issue. The svn repository is out of date, sorry about the confusion. In the future it will be deleted, the development now happens in git. >>> >>> Please download the source code either from the Sourceforge git repository or the Github repository, this way >>> >>> git clone gi...@gi...:lantiga/vmtk.git >>> >>> When you configure the project with CMake, turn VMTK_USE_SUPERBUILD OFF, and you should be able to go ahead the same way as before. >>> >>> Sorry again about the misleading docs. >>> >>> As for the sys/time.h error, let me see if it still comes up with the correct repository. If it does, you'll just need to disable one experimental component, nothing major. >>> >>> Best regards >>> >>> Luca >>> >>> >>> On Sep 21, 2011, at 12:35 PM, Anton, Raul wrote: >>> >>>> Thanks Luca! >>>> I downloaded it from sourceforge using: >>>> svn co https://vmtk.svn.sourceforge.net/svnroot/vmtk vmtk >>>> It seems that we are closer to get it....now the compilation errors has decreased from 18 to 1. An the error is the following: >>>> Error 1 fatal error C1083: Cannot open include file: 'sys/time.h': No such file or directory d:\vmtk\vmtk\vtkvmtk\utilities\stellar_1.0\src\Starbase.h 9 >>>> Any hint?? thanks raul >>>> >>>> ________________________________________ >>>> From: Luca Antiga [luc...@gm...] >>>> Sent: Wednesday, September 21, 2011 12:10 PM >>>> To: Anton, Raul >>>> Cc: vmt...@li... >>>> Subject: Re: [vmtk-users] vmtk windows installation >>>> >>>> Thanks, indeed I see the problem: the code is not up to date for some reason. >>>> How did you get it? Github or Sourceforge? >>>> In any case, you can fix the file by replacing >>>> VTK_VMTK_MISC_EXPORT >>>> with >>>> VTK_VMTK_COMPUTATIONAL_GEOMETRY_EXPORT >>>> and rebuild. >>>> Hope this works >>>> >>>> >>>> Luca >>>> >>>> >>>> >>>> On Sep 21, 2011, at 10:17 AM, Anton, Raul wrote: >>>> >>>>> Luca, >>>>> I attach it. Thanks! >>>>> raúl >>>>> >>>>> ________________________________________ >>>>> From: Luca Antiga [luc...@gm...] >>>>> Sent: Wednesday, September 21, 2011 10:13 AM >>>>> To: Anton, Raul >>>>> Cc: vmt...@li... >>>>> Subject: Re: [vmtk-users] vmtk windows installation >>>>> >>>>> Hi Raul, >>>>> sorry if I haven't been clear. >>>>> I'd like to see the file in your source tree, to make sure it's up to date with the latest development version (I just need the vtkvmtkAppendFilter.h). >>>>> Thanks! >>>>> >>>>> Luca >>>>> >>>>> >>>>> On Sep 21, 2011, at 10:08 AM, Anton, Raul wrote: >>>>> >>>>>> Hi Luca, >>>>>> >>>>>> Sorry but I did not understand your answer. Have you tried to attach a file that I have to place in my vmtk source files? if so I did not get it or do you want me to post the vmtk/vtkVmtk/ComputationalGeometry/vtkvmtkAppendFilter.c (from the vmtk source files) in the mailinglist in order you to take a look to it? sorry... >>>>>> Thanks! raúl >>>>>> >>>>>> ________________________________ >>>>>> From: Luca Antiga [luc...@gm...] >>>>>> Sent: Wednesday, September 21, 2011 8:56 AM >>>>>> To: Anton, Raul >>>>>> Cc: vmt...@li... >>>>>> Subject: Re: [vmtk-users] vmtk windows installation >>>>>> >>>>>> Hi Raul, >>>>>> I don't have a Windows with Visual Studio available, but if anybody has it would be good if the new SuperBuild system >>>>>> in the repository could be given a try. The guidelines might not be strictly needed anymore. >>>>>> >>>>>> Anyway, it looks like you have issues with vtkvmtkAppendFilter only. The class was moved and between February and March >>>>>> this year had a problem that lead to what you're getting. The issue is now fixed (or I thought so), but probably there's still something >>>>>> going on. >>>>>> Can you please post the contents of this file in your source tree: >>>>>> vmtk/vtkVmtk/ComputationalGeometry/vtkvmtkAppendFilter >>>>>> >>>>>> Thanks! >>>>>> >>>>>> Luca >>>>>> >>>>>> >>>>>> On Sep 20, 2011, at 7:08 PM, Anton, Raul wrote: >>>>>> >>>>>> Hello all, >>>>>> I have a problem with vmtk Windows installation. I have followed the guidelines in: >>>>>> http://www.vmtk.org/pmwiki/uploads/Main/How-to-compile-VMTK-on-windows-visualstudio.pdf >>>>>> I have used the last version of ITK, Python, and VTK. >>>>>> I have no problem to install VTK and ITK with Cmake and visual studio. >>>>>> However if Itry to install vmtk, there is no problem to configure it with cmake but I get hundreds of errors when compiling in visual studio (8.0 2005). >>>>>> If instead of using the last vtk version, I use VTK 5.4 then the errors in vmtk compilation decreases to 18. But I do not manage to install it without any error. >>>>>> Any hints??? Thanks a lot!! >>>>>> >>>>>> >>>>>> The errors that I get are the followings: >>>>>> Error 187 error LNK2019: unresolved external symbol "__declspec(dllimport) const vtkvmtkAppendFilter::`vftable'" (__imp_??_7vtkvmtkAppendFilter@@6B@) referenced in function "protected: __thiscall vtkvmtkAppendFilter::vtkvmtkAppendFilter(void)" (??0vtkvmtkAppendFilter@@IAE@XZ) vtkvmtkAppendFilter.obj >>>>>> Error 188 error LNK2001: unresolved external symbol "private: virtual char const * __thiscall vtkvmtkAppendFilter::GetClassNameInternal(void)const " (?GetClassNameInternal@vtkvmtkAppendFilter@@EBEPBDXZ) vtkvmtkAppendFilter.obj >>>>>> Error 189 error LNK2001: unresolved external symbol "public: virtual int __thiscall vtkvmtkAppendFilter::IsA(char const *)" (?IsA@vtkvmtkAppendFilter@@UAEHPBD@Z) vtkvmtkAppendFilter.obj >>>>>> Error 190 error LNK2001: unresolved external symbol "protected: virtual class vtkObjectBase * __thiscall vtkvmtkAppendFilter::NewInstanceInternal(void)const " (?NewInstanceInternal@vtkvmtkAppendFilter@@MBEPAVvtkObjectBase@@XZ) vtkvmtkAppendFilter.obj >>>>>> Error 191 error LNK2001: unresolved external symbol "public: virtual void __thiscall vtkvmtkAppendFilter::SetMergeDuplicatePoints(int)" (?SetMergeDuplicatePoints@vtkvmtkAppendFilter@@UAEXH@Z) vtkvmtkAppendFilter.obj >>>>>> Error 192 error LNK2001: unresolved external symbol "public: virtual int __thiscall vtkvmtkAppendFilter::GetMergeDuplicatePoints(void)" (?GetMergeDuplicatePoints@vtkvmtkAppendFilter@@UAEHXZ) vtkvmtkAppendFilter.obj >>>>>> Error 193 error LNK2001: unresolved external symbol "public: virtual void __thiscall vtkvmtkAppendFilter::MergeDuplicatePointsOn(void)" (?MergeDuplicatePointsOn@vtkvmtkAppendFilter@@UAEXXZ) vtkvmtkAppendFilter.obj >>>>>> Error 194 error LNK2001: unresolved external symbol "public: virtual void __thiscall vtkvmtkAppendFilter::MergeDuplicatePointsOff(void)" (?MergeDuplicatePointsOff@vtkvmtkAppendFilter@@UAEXXZ) vtkvmtkAppendFilter.obj >>>>>> Error 195 fatal error LNK1120: 8 unresolved externals C:\vtkbin3\bin\Release\vtkvmtkComputationalGeometry.dll >>>>>> Error 196 error LNK2019: unresolved external symbol "__declspec(dllimport) public: virtual int __thiscall vtkvmtkAppendFilter::IsA(char const *)" (__imp_?IsA@vtkvmtkAppendFilter@@UAEHPBD@Z) referenced in function "struct _object * __cdecl PyvtkvmtkAppendFilter_IsA(struct _object *,struct _object *)" (?PyvtkvmtkAppendFilter_IsA@@YAPAU_object@@PAU1@0@Z) vtkvmtkAppendFilterPython.obj >>>>>> Error 197 error LNK2019: unresolved external symbol "__declspec(dllimport) public: class vtkvmtkAppendFilter * __thiscall vtkvmtkAppendFilter::NewInstance(void)const " (__imp_?NewInstance@vtkvmtkAppendFilter@@QBEPAV1@XZ) referenced in function "struct _object * __cdecl PyvtkvmtkAppendFilter_NewInstance(struct _object *,struct _object *)" (?PyvtkvmtkAppendFilter_NewInstance@@YAPAU_object@@PAU1@0@Z) vtkvmtkAppendFilterPython.obj >>>>>> Error 198 error LNK2019: unresolved external symbol "__declspec(dllimport) public: static class vtkvmtkAppendFilter * __cdecl vtkvmtkAppendFilter::SafeDownCast(class vtkObjectBase *)" (__imp_?SafeDownCast@vtkvmtkAppendFilter@@SAPAV1@PAVvtkObjectBase@@@Z) referenced in function "struct _object * __cdecl PyvtkvmtkAppendFilter_SafeDownCast(struct _object *,struct _object *)" (?PyvtkvmtkAppendFilter_SafeDownCast@@YAPAU_object@@PAU1@0@Z) vtkvmtkAppendFilterPython.obj >>>>>> Error 199 error LNK2019: unresolved external symbol "__declspec(dllimport) public: virtual void __thiscall vtkvmtkAppendFilter::SetMergeDuplicatePoints(int)" (__imp_?SetMergeDuplicatePoints@vtkvmtkAppendFilter@@UAEXH@Z) referenced in function "struct _object * __cdecl PyvtkvmtkAppendFilter_SetMergeDuplicatePoints(struct _object *,struct _object *)" (?PyvtkvmtkAppendFilter_SetMergeDuplicatePoints@@YAPAU_object@@PAU1@0@Z) vtkvmtkAppendFilterPython.obj >>>>>> Error 200 error LNK2019: unresolved external symbol "__declspec(dllimport) public: virtual int __thiscall vtkvmtkAppendFilter::GetMergeDuplicatePoints(void)" (__imp_?GetMergeDuplicatePoints@vtkvmtkAppendFilter@@UAEHXZ) referenced in function "struct _object * __cdecl PyvtkvmtkAppendFilter_GetMergeDuplicatePoints(struct _object *,struct _object *)" (?PyvtkvmtkAppendFilter_GetMergeDuplicatePoints@@YAPAU_object@@PAU1@0@Z) vtkvmtkAppendFilterPython.obj >>>>>> Error 201 error LNK2019: unresolved external symbol "__declspec(dllimport) public: virtual void __thiscall vtkvmtkAppendFilter::MergeDuplicatePointsOn(void)" (__imp_?MergeDuplicatePointsOn@vtkvmtkAppendFilter@@UAEXXZ) referenced in function "struct _object * __cdecl PyvtkvmtkAppendFilter_MergeDuplicatePointsOn(struct _object *,struct _object *)" (?PyvtkvmtkAppendFilter_MergeDuplicatePointsOn@@YAPAU_object@@PAU1@0@Z) vtkvmtkAppendFilterPython.obj >>>>>> Error 202 error LNK2019: unresolved external symbol "__declspec(dllimport) public: virtual void __thiscall vtkvmtkAppendFilter::MergeDuplicatePointsOff(void)" (__imp_?MergeDuplicatePointsOff@vtkvmtkAppendFilter@@UAEXXZ) referenced in function "struct _object * __cdecl PyvtkvmtkAppendFilter_MergeDuplicatePointsOff(struct _object *,struct _object *)" (?PyvtkvmtkAppendFilter_MergeDuplicatePointsOff@@YAPAU_object@@PAU1@0@Z) vtkvmtkAppendFilterPython.obj >>>>>> Error 203 fatal error LNK1120: 7 unresolved externals C:\vtkbin3\bin\Release\vtkvmtkComputationalGeometryPythonD.dll >>>>>> Error 426 fatal error C1083: Cannot open include file: 'sys/time.h': No such file or directory d:\vmtk\vmtk\vtkvmtk\utilities\stellar_1.0\src\Starbase.h 9 >>>>>> >>>>>> ------------------------------------------------------------------------------ >>>>>> All the data continuously generated in your IT infrastructure contains a >>>>>> definitive record of customers, application performance, security >>>>>> threats, fraudulent activity and more. Splunk takes this data and makes >>>>>> sense of it. Business sense. IT sense. Common sense. >>>>>> http://p.sf.net/sfu/splunk-d2dcopy1_______________________________________________ >>>>>> vmtk-users mailing list >>>>>> vmt...@li...<mailto:vmt...@li...> >>>>>> https://lists.sourceforge.net/lists/listinfo/vmtk-users >>>>>> >>>>>> >>>>>> ------------------------------------------------------------------------------ >>>>>> All the data continuously generated in your IT infrastructure contains a >>>>>> definitive record of customers, application performance, security >>>>>> threats, fraudulent activity and more. Splunk takes this data and makes >>>>>> sense of it. Business sense. IT sense. Common sense. >>>>>> http://p.sf.net/sfu/splunk-d2dcopy1 >>>>>> _______________________________________________ >>>>>> vmtk-users mailing list >>>>>> vmt...@li... >>>>>> https://lists.sourceforge.net/lists/listinfo/vmtk-users >>>>> <vtkvmtkAppendFilter.h> >>>> ------------------------------------------------------------------------------ >>>> All the data continuously generated in your IT infrastructure contains a >>>> definitive record of customers, application performance, security >>>> threats, fraudulent activity and more. Splunk takes this data and makes >>>> sense of it. Business sense. IT sense. Common sense. >>>> http://p.sf.net/sfu/splunk-d2dcopy1 >>>> _______________________________________________ >>>> vmtk-users mailing list >>>> vmt...@li... >>>> https://lists.sourceforge.net/lists/listinfo/vmtk-users >>> >> >> >> ------------------------------------------------------------------------------ >> All the data continuously generated in your IT infrastructure contains a >> definitive record of customers, application performance, security >> threats, fraudulent activity and more. Splunk takes this data and makes >> sense of it. Business sense. IT sense. Common sense. >> http://p.sf.net/sfu/splunk-d2dcopy1 >> _______________________________________________ >> vmtk-users mailing list >> vmt...@li... >> https://lists.sourceforge.net/lists/listinfo/vmtk-users > > ------------------------------------------------------------------------------ > All the data continuously generated in your IT infrastructure contains a > definitive record of customers, application performance, security > threats, fraudulent activity and more. Splunk takes this data and makes > sense of it. Business sense. IT sense. Common sense. > http://p.sf.net/sfu/splunk-d2dcopy1 > _______________________________________________ > vmtk-users mailing list > vmt...@li... > https://lists.sourceforge.net/lists/listinfo/vmtk-users |