:fix bug finding start codon with -C flag
:fix bug finding start codon with -C flag
changes stats report to count transcripts inste...
changes stats report to count transcripts inste...
muscleGenes.pl & muscleProducts.pl (in dbutils)...
muscleGenes.pl & muscleProducts.pl (in dbutils)...
fix ordering on circular genomes, bug led to in...
fix ordering on circular genomes, bug led to in...
:forgot to handle circular genome length in sta...
:forgot to handle circular genome length in sta...
:fixed minor reporting issues for circular genomes
:fixed minor reporting issues for circular genomes
fixed bugs in implementation of circular genome
fixed bugs in implementation of circular genome
now allows exon to span the origin handling extended to remaining reports: .aln,...
now allows exon to span the origin handling extended to remaining reports: .aln,...
:improve handling of wrap-wround coordinates on...
:improve handling of wrap-wround coordinates on...
removed bad character from cov_g1b_db reference db
removed bad character from cov_g1b_db reference db
updated readme for metter margins
updated readme for metter margins
The presentation should give you a feel for the design philosophy and basic algorithm...
The presentation should give you a feel for the design philosophy and basic algorithm...
revised handling of non-canonical splicing to m...
revised handling of non-canonical splicing to m...
invoke cd-hit by sym link
invoke cd-hit by sym link
Spike Protein Fusion Peptide and Feline Coronavirus Virulence http://wwwnc.cdc.g...
Spike Protein Fusion Peptide and Feline Coronavirus Virulence http://wwwnc.cdc.g...
VIGOR, an annotation program for small viral genomes http://www.biomedcentral.co...
VIGOR, an annotation program for small viral genomes http://www.biomedcentral.co...
Genomic analysis of 16 Colorado human NL63 coronaviruses identifies a new genotype,...
Genomic analysis of 16 Colorado human NL63 coronaviruses identifies a new genotype,...
needed to add code to fuse exons to fix unantic...
needed to add code to fuse exons to fix unantic...
implemented hack to deal with bad refs where ri...
implemented hack to deal with bad refs where ri...
fixed bug in subsequence subroutine
fixed bug in subsequence subroutine
modify pseudogene validation to consider min_f...
modify pseudogene validation to consider min_f...
added new tag: min_functional_len, and modified...
added new tag: min_functional_len, and modified...
restored missing PB1-F2 references
restored missing PB1-F2 references
fixed mislabeled PB1 references
fixed mislabeled PB1 references
updated PB1-F2 references for flu A
updated PB1-F2 references for flu A
fixed std_tbl_rpt for circular gene
fixed std_tbl_rpt for circular gene
Initial commit
Initial commit