[Vcftools-help] vcftools got the chromosome notion changed

[张. <zha...@ge...>]

Hi,


      Thanks for taking time off for this letter.
      Recently I used vcftools to extract certain samples' S SNPs information. But the new vcf file had the chromosome ID changed. My raw vcf file is with chromosome IDs from 1-22 and the new vcf's chromosome IDs are from 0-21. How can I avoid this? Looking forward your reply.


Best,
Iris