Re: [Vcftools-help] recode polyploid data

[Adam A. <ada...@gm...>]

I'm afraid that polyploidy isn't currently supported by the C++ module of
VCFtools.

Adam

On 13 April 2011 11:51, Uitdewilligen, Jan <jan...@wu...> wrote:

> Hi,
>
>
>
> When rewriting a VCF filtered file using --recode, tetraploid GT fields
> (eg. 1/1/0/0/) get truncated to diploid calls (eg. 1/1). Can you solve this?
>
>
>
>
> Thanks, Jan
>
>
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-- 
Adam Auton
Post-Doctoral Research Scientist,
Wellcome Trust Centre for Human Genetics,
University of Oxford
Roosevelt Drive
Oxford
OX3 7BN
UK