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Re: [Vcftools-help] on svn update
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From: Mao J. <jia...@gm...> - 2010-12-31 14:08:14
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Dear Adam, Following your advice, I firstly ran "svn checkout https://vcftools.svn.sourceforge.net/svnroot/vcftools vcftools", and then "svn update". But, I still got "Skipped '.' ". Could you please give me any direction? I expect your helps. Jian-Feng abt6-mao-mbp:tabix-0.2.3 jianfengmao$ svn checkout https://vcftools.svn.sourceforge.net/svnroot/vcftools vcftools A vcftools/file_release A vcftools/file_release/vcftools_0.1.1_source.tar.gz A vcftools/file_release/VCFtools_0.1.3.1.tar.gz A vcftools/file_release/vcftools_0.1.2_source.tar.gz A vcftools/file_release/vcftools_0.1_source.tar.gz A vcftools/file_release/VCFtools_0.1.3.2.tar.gz A vcftools/file_release/VCFtools_0.1.3.tar.gz A vcftools/file_release/vcftools_0.1.1_source_old.tar.gz A vcftools/cpp A vcftools/cpp/vcf_entry.cpp A vcftools/cpp/vcftools.cpp A vcftools/cpp/output_log.cpp A vcftools/cpp/parameters.cpp A vcftools/cpp/vcf_entry.h A vcftools/cpp/vcftools.h A vcftools/cpp/vcf_file_diff.cpp A vcftools/cpp/vcf_file_filters.cpp A vcftools/cpp/output_log.h A vcftools/cpp/parameters.h A vcftools/cpp/vcf_entry_setters.cpp A vcftools/cpp/vcf_file.cpp A vcftools/cpp/vcf_file.h A vcftools/cpp/Makefile A vcftools/cpp/vcf_entry_getters.cpp A vcftools/cpp/vcf_file_output.cpp A vcftools/perl A vcftools/perl/vcf-subset A vcftools/perl/FaSlice.pm A vcftools/perl/query-vcf A vcftools/perl/test.t A vcftools/perl/vcf-concat A vcftools/perl/vcf-annotate A vcftools/perl/ChangeLog A vcftools/perl/Vcf.pm A vcftools/perl/vcf-convert A vcftools/perl/vcf-isec A vcftools/perl/vcf-validator A vcftools/perl/vcf-to-tab A vcftools/perl/compare-vcf A vcftools/perl/vcf-sort A vcftools/perl/fill-an-ac A vcftools/perl/fill-aa A vcftools/perl/vcf-shuffle-cols A vcftools/perl/fill-rsIDs A vcftools/perl/VcfStats.pm A vcftools/perl/vcf-stats A vcftools/perl/merge-vcf A vcftools/perl/Makefile A vcftools/website A vcftools/website/VCF-poster.pdf A vcftools/website/specs.html A vcftools/website/src A vcftools/website/src/index.inc A vcftools/website/src/perl_module.inc A vcftools/website/src/docs.inc A vcftools/website/src/options.inc A vcftools/website/src/specs.inc A vcftools/website/src/license.inc A vcftools/website/src/index.php A vcftools/website/favicon.png A vcftools/website/default.css A vcftools/website/img A vcftools/website/img/bgcontainer.gif A vcftools/website/img/quote.gif A vcftools/website/img/bgcode.gif A vcftools/website/img/li.gif A vcftools/website/img/search.gif A vcftools/website/img/bg.gif A vcftools/website/img/header.gif A vcftools/website/img/bgul.gif A vcftools/website/Makefile A vcftools/website/README A vcftools/website/favicon.ico A vcftools/.project A vcftools/.cproject A vcftools/README.txt A vcftools/Makefile A vcftools/.settings A vcftools/.settings/org.eclipse.ltk.core.refactoring.prefs A vcftools/examples A vcftools/examples/annotate.out A vcftools/examples/subset.vcf A vcftools/examples/shuffle-test.vcf A vcftools/examples/annotate.txt A vcftools/examples/cmp-test-a.vcf A vcftools/examples/subset.indels.out A vcftools/examples/query-test.out A vcftools/examples/cmp-test-a-3.3.vcf A vcftools/examples/cmp-test-b.vcf A vcftools/examples/cmp-test-b-3.3.vcf A vcftools/examples/subset.SNPs.out A vcftools/examples/merge-test.vcf.out A vcftools/examples/isec-n2-test.vcf.out A vcftools/examples/annotate2.out A vcftools/examples/concat-a.vcf A vcftools/examples/invalid-4.0.vcf A vcftools/examples/cmp-test.out A vcftools/examples/concat-b.vcf A vcftools/examples/annotate-test.vcf A vcftools/examples/concat-c.vcf A vcftools/examples/merge-test-a.vcf A vcftools/examples/merge-test-b.vcf A vcftools/examples/valid-4.0.vcf.stats A vcftools/examples/merge-test-c.vcf A vcftools/examples/valid-4.0.vcf A vcftools/examples/concat.out A vcftools/examples/valid-3.3.vcf U vcftools Checked out revision 399. abt6-mao-mbp:tabix-0.2.3 jianfengmao$ svn update Skipped '.' 2010/12/31 Adam Auton <ada...@gm...>: > Did you run the following command before using "svn update"? > svn checkout https://vcftools.svn.sourceforge.net/svnroot/vcftools vcftools > Kind regards, > Adam > > On 31 December 2010 13:28, Mao Jianfeng <jia...@gm...> wrote: >> >> Dear VCFtools helpers, >> >> I am new to Unix and genomics. >> >> When I intent to update VCFtools, I got "Skipped ''."". I want to know >> what it is meaning. >> >> Thank you in Advance. >> >> Best. >> >> abt6-mao-mbp:tabix-0.2.3 jianfengmao$ svn update >> Skipped '.' >> >> >> -- >> Jian-Feng, Mao >> >> the Institute of Botany, >> Chinese Academy of Botany, >> >> >> ------------------------------------------------------------------------------ >> Learn how Oracle Real Application Clusters (RAC) One Node allows customers >> to consolidate database storage, standardize their database environment, >> and, >> should the need arise, upgrade to a full multi-node Oracle RAC database >> without downtime or disruption >> http://p.sf.net/sfu/oracle-sfdevnl >> _______________________________________________ >> Vcftools-help mailing list >> Vcf...@li... >> https://lists.sourceforge.net/lists/listinfo/vcftools-help > > > |
