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TASSEL 3.0 redesign

With the advent of next generation sequencing data, we are now needing to analyze millions of SNPs for thousands of lines. Although some of our statistical approaches are appropriate, the data structures needed to be improved.

TASSEL 3.0 will include:
Storing data in efficient BLOBs.
Nucleotide data will be packed into 4-bits
Variable and invariante bases will be efficient stored in seperate stuctures.
High efficiency browser

Posted by Ed Buckler 2009-07-01

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