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TASSEL
Feature Requests
TASSEL Feature Requests
TASSEL is a bioinformatics software package
Brought to you by:
buckler4
,
tcasstevens
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Maizegenetics4 Test
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Tassel3 Standalone
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Next_Release_(example) (9)
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open (48)
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buckler4 (2)
jcg233 (3)
jonzhang (3)
pjbradbury (2)
tcasstevens (29)
zhiwu (7)
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110
hapmap-fasta and hmc output
Next_Release_(example)
open
2014-04-28
2014-04-28
5
109
TASSEL5 - Only add depth to input alignment if it contains it
Next_Release_(example)
open
2014-03-06
2014-03-06
5
107
GBS DiscoverySNPCallerPlugin modifications
Next_Release_(example)
open
Jeff Glaubitz
2013-10-21
2013-10-30
5
104
more filters in gui
Next_Release_(example)
open
Terry Casstevens
2013-04-12
2013-04-22
5
101
SNP Caller Log Tags
Next_Release_(example)
open
Jeff Glaubitz
2013-04-09
2013-04-09
5
100
GBS Pipeline Run All Steps
Next_Release_(example)
open
Terry Casstevens
2013-04-09
2013-04-09
5
99
FilterAlignPlugin - Percent missing
Next_Release_(example)
open
Terry Casstevens
2013-04-09
2013-04-09
5
98
FilterAlignPlugin - random subset
Next_Release_(example)
open
Terry Casstevens
2013-04-09
2014-05-26
5
97
TagsToSNPByAlignment -mUpd optionally specify new TOPM
Next_Release_(example)
open
Terry Casstevens
2013-03-08
2013-04-09
5
96
TagsToSNPByAlignmentPlugin -- Specify Output Filename
open
Terry Casstevens
2013-01-08
2013-01-09
5
95
RawReadsToHapMapPlugin Additional Features
open
Terry Casstevens
2013-01-08
2013-01-09
5
94
ParseBarcodeRead accept new enzyme as parameter
None
open
Terry Casstevens
2012-08-31
2013-01-03
5
92
Locus names in LD plot
None
open
Terry Casstevens
2012-07-27
2012-07-31
5
91
PCA - monomorphic markers
None
open
Terry Casstevens
2012-07-02
2012-07-31
5
90
Check folders before GBS analysis
None
open
Jeff Glaubitz
2012-05-17
2012-06-27
5
89
Overwrite confirmation
None
open
Terry Casstevens
2012-05-10
2012-06-25
5
87
Merge file by sites
None
open
Terry Casstevens
2012-03-10
2012-03-13
5
84
Permutation Test - MLM
None
open
Peter Bradbury
2011-07-26
2013-01-03
5
83
fields strand, assembly#, center, protLSID, assayLSID, panel
None
open
Terry Casstevens
2011-06-06
2013-01-03
5
81
Filter out SNPs by position
None
open
Terry Casstevens
2011-06-03
2011-06-04
5
79
Search tool
None
open
Terry Casstevens
2011-06-03
2011-06-04
5
78
% on progressive bar
None
open
Terry Casstevens
2011-04-16
2011-04-21
5
76
multiple methods for GS
None
open
Peter Bradbury
2011-03-01
2011-04-06
5
74
Default for minimun count in site filter
None
open
Ed Buckler
2010-11-18
2010-12-07
5
66
heterozgyosity support
None
open
Terry Casstevens
2010-09-22
2013-01-03
9
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