STRfinder is a python based tool to detect and genotype short tandem repeat regions in complex genome, using paired-end short read sequencing data. It can genotype allele length that is much longer than a read.

Features

  • pathologic expansion of short tandem repeats
  • STR genotyping tool

Project Samples

For longer alleles, STRfinder predictions are much more accurate than lobSTR and RepeatSeq

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Registered

2014-07-21
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