Re: [SO-devel] new polypeptide terms

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Hello=20Karen,

Good.=20=20I=20see=20Gabby's=20(hello=20Gabby)=20in=20the=20Thornton=20gro=
up,=20so=20will=20be
able=20to=20set=20me=20right=20if=20I've=20got=20the=20details=20wrong.

I=20wonder=20if=20it=20would=20be=20useful=20to=20include=20terms=20like=20=
tetrapeptide,
pentapeptide,=20and=20so=20forth,=20in=20SO.=20=20I=20can=20see=20the=20ca=
se=20for=20verifying=20the
assertions=20in=20a=20paper=20(such=20as=20"we=20synthesized=20the=20hexad=
ecapeptide"
followed=20by=20a=20string=20of=20letters=20which=20may=20or=20may=20not=20=
have=2016=20members).

Chris=20was=20talking=20about=20a=20has_part{n}=20relation=20elsewhere---w=
ould=20it=20be
better=20to=20have=20beta_turn,=20asx_turn=20and=20st_turn=20with=20has_pa=
rt{4}=20residue
and=20gamma_turn=20with=20has_part{3}=20residue,=20or=20have=20them=20as=20=
children=20of
tetrapeptide_turn=20and=20tripeptide_turn=20respectively?

Best=20wishes,
Colin.

>=20-----Original=20Message-----
>=20From:=20Karen=20Eilbeck=20[mailto:kei...@ge...]
>=20Sent:=2020=20August=202007=2018:07
>=20To:=20SO=20developers
>=20Cc:=20Gabrielle=20Reeves
>=20Subject:=20Re:=20[SO-devel]=20new=20polypeptide=20terms
>=20
>=20Hi=20Colin,
>=20I=20think=20Gabby=20should=20take=20a=20look=20at=20this=20when=20she=20=
gets=20back=20from
>=20vacation.
>=20
>=20Thank=20you=20for=20being=20on=20top=20of=20our=20synonyms.=20Its=20gr=
eat=20that=20we=20have=20a
>=20group=20that=20uses=20them=20so=20extensively.=20I=20checked=20in=20th=
e=20changes=20you
>=20requested=20on=20the=20tracker.
>=20
>=20Cheers,
>=20Karen
>=20
>=20
>=20On=20Aug=2020,=202007,=20at=203:57=20AM,=20Colin=20Batchelor=20wrote:
>=20
>=20>=20Hello,
>=20>
>=20>=20I'm=20delighted=20to=20see=20the=20collection=20of=20new=20polypep=
tide=20terms=20in=20SO.
>=20>
>=20>=20A=20thought=20with=20regard=20to=20the=20asx_*=20terms=20(SO:00009=
12,=20SO:0001106
>=20>=20etc.):
>=20>=20"asparagine=20turn"=20exists=20in=20the=20literature,=20as=20might=
=20"aspartate
turn".
>=20>=20How=20ought=20SO=20to=20represent=20those=20phrases?=20=20The=20sa=
me=20applies=20to=20the
st_*
>=20>=20terms=20(SO:0001141,=20SO:00011126,=20SO:0001127),=20where=20"seri=
ne=20turn",
for
>=20>=20example,=20could=20turn=20up.
>=20>
>=20>=20I'll=20put=20specific=20requests=20for=20extra=20synonyms=20or=20c=
hanging=20synonym
>=20>=20scopes
>=20>=20on=20the=20tracker.
>=20>
>=20>=20Best=20wishes,
>=20>=20Colin.
>=20>
>=20>=20--
>=20>=20Dr=20Colin=20Batchelor=20MChem=20MRSC,=20Production=20Systems=20An=
alyst
>=20>=20RSC=20Publishing,
>=20>=20Royal=20Society=20of=20Chemistry,=20Thomas=20Graham=20House,=20Cam=
bridge=20UK=20CB4
0WF
>=20>=20b...@rs...=20t:=20+44=201223=20432280
>=20>
>=20>
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This=20communication=20(including=20any=20attachments)=20is=20intended=20f=
or=20the=20use=20of=20the=20addressee=20only=20and=20may=20contain=20confi=
dential,=20privileged=20or=20copyright=20material.=20It=20may=20not=20be=20=
relied=20upon=20or=20disclosed=20to=20any=20other=20person=20without=20the=
=20consent=20of=20the=20RSC.=20If=20you=20have=20received=20it=20in=20erro=
r,=20please=20contact=20us=20immediately.=20Any=20advice=20given=20by=20th=
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respect,=20the=20RSC=20owes=20no=20duty=20of=20care=20and=20shall=20not=20=
be=20liable=20for=20any=20resulting=20damage=20or=20loss.=20The=20RSC=20ac=
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