Re: [SO-devel] New term suggestion

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Fine, except that mitochondrion is NOT a plastid

M

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From: Lincoln Stein <ls...@cs...>
To: son...@li...
Subject: Re: [SO-devel] New term suggestion
Date: Tue, 21 Feb 2006 13:16:47 -0500
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Cc: "Michael Ashburner (Genetics)" <ma...@ge...>
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How about:

	organelle chromosome
		ISA plastid chromosome
			ISA mitochondrial chromosome
			ISA chloroplast chromosome

Lincoln

On Tuesday 21 February 2006 08:36, Michael Ashburner (Genetics) wrote:
> David
>
> I think the term 'mitochondrial chromosome' could well be added
> and, for completion also 'chloroplast chromosome', as types of
> chromosome.
>
> Karen: What do you think ?
>
> Michael
>
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> <http://sourceforge.net/mailarchive/forum.php?forum=song-devel> Date: Tue,
> 21 Feb 2006 08:05:04 -0500
>
> Hi Michael,
>
> >>  genome has been suggested as a new term.
> >>  I am wary of this because a genome is for the most part discontinuous,
> >>  and stitching it up to make a region of continuous sequence would be
> >>  somewhat arbitrary.
> >>
> >>  Anyone else have an opinion?
>
> Just curious...  What about mitochondrial genomes?
> We're using "chromosome" in chado for the Dmel mitochondrial genome...
>
> Best,
>
> -Dave
>
> On Tue, 21 Feb 2006 6:33, Michael Ashburner (Genetics) wrote:
> > I agree it has no place.
> >
> > M
> >
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> >>
> >>  genome has been suggested as a new term.
> >>  I am wary of this because a genome is for the most part discontinuous,
> >>  and stitching it up to make a region of continuous sequence would be
> >>  somewhat arbitrary.
> >>
> >>  Anyone else have an opinion?
> >>  --Karen
> >>
> >>  Initial Comment:
> >>  Suggestion: How about a term "genome" ?
> >>
> >>  It itself is used within other term names, their definitions, and
> >> even a
> >>  relationship (genome_of).   Primarily, I was simply hoping to reason
> >>  that a
> >>  chromosome was part_of a genome, but presumably this term would be
> >>  wide-reaching (many possible "parts")...
> >>
> >>  Possible defs:
> >>  http://www.google.com/search?oi=defmore&defl=en&q=define:Genome
> >>
> >>
> >>
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Lincoln D. Stein
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