File	Date	Author	Commit
README.txt	2014-04-25	Andre Schumacher	[b3d108] Moving repository to GitHub

Read Me

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# https://github.com/HadoopGenomics/SeqPig                                    #
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# Releases, however, will continued to be published here:                     #
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# https://sourceforge.net/projects/seqpig/files/                              #
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SeqPig is a library of import and export functions for file formats
commonly used in bioinformatics for Apache Pig. Additionally, it
provides a collection of Pig user-defined functions (UDF's) that allow
for processing of aligned and unaligned sequence data. Currently
SeqPig supports BAM/SAM, FastQ and Qseq input and output and FASTA
input. It is built on top of the Hadoop-BAM library. Fore more
information see

http://seqpig.sourceforge.net/

and the documentation that comes with the release.

Releases of SeqPig come bundled with Picard/Samtools, which were developed at
the Wellcome Trust Sanger Institute, and Biodoop/Seal, which were developed
at the Center for Advanced Studies, Research and Development in Sardinia. See

http://samtools.sourceforge.net/
http://biodoop-seal.sourceforge.net/