Bioinformatics pipeline for discovery of genetic variants from NGS reads.

Features

  • Support Illumina reads
  • Detect mutations in one exome
  • Detect denovo mutation in one family
  • Detect somatic mutations in tumor/normal pair

Project Samples

Project Activity

See All Activity >

Categories

Bio-Informatics

License

MIT License

Follow scalpel

scalpel Web Site

Other Useful Business Software
Train ML Models With SQL You Already Know Icon
Train ML Models With SQL You Already Know

BigQuery automates data prep, analysis, and predictions with built-in AI assistance.

Build and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.
Try Free
Rate This Project
Login To Rate This Project

User Ratings

★★★★★
★★★★
★★★
★★
1
0
0
0
0
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 5 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 5 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 5 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 5 / 5

User Reviews

  • Great tool.
Read more reviews >

Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

C++, Perl

Related Categories

Perl Bio-Informatics Software, C++ Bio-Informatics Software

Registered

2013-10-24