Activity for SBW (Systems Biology Workbench)
-
Frank Bergmann posted a comment on ticket #3
First of all let me recommend that you dont use them (as they have not been updated since 2004, you'd be much better of with newer optimization tools, such as COPASI: http://copasi.org). That being said, If you really wanted to use them, you'd require: - a windows machine (or a virtual machine running windows(preferably 32bit)) - first install the SBW framework (as available here: https://sourceforge.net/projects/sbw/files/sbw/) note i do not know which version will work with the SBW optimizers....
-
Shahin Bayramov posted a comment on ticket #3
Dear colleagues, I ask you to help me for installing optinstall.exe, we have such a message during installation: "SBW C/C++ library filed to load, unable to link to SBW". Thank you in advance
-
- properly update version
-
- update the Broker.rc.cmake file with the needed changes for 2019
-
- update resource file for 2019
-
- update rc file
-
- set pointers to 0 after delete
-
- fix compilation with msvc 2019
-
- update install directories
-
- remove visual studio 2008 files
-
- update visual studio files
-
Antonio Trande posted a comment on ticket #58
Thank you Doc.
-
Hello, i've made new release sources available here: https://sourceforge.net/projects/sbw/files/sbw/2.12.2/ i hope those help, best Frank
-
SBW (Systems Biology Workbench) released /sbw/2.12.2/sbw-core-2.12.2.zip
-
-
-
-
- fix compilation on linux, bump version
-
SBW 2.12.1 source code
-
- sort shutdown problems
-
- updated ignore lists
-
- allow to link against a newish numpy
-
-
-
-
- fix include order
-
- fix copy error
-
- more cleanup
-
- export cmake configuration
-
- updated ignore list
-
- make it easier to link broker against additional libraries
-
-
-
-
-
- cleanup
-
- bump version
-
- fixed API export for dlls
-
- ensure current include files are taken
-
- cleanup, plugging memory leaks
-
- fix compilation on clang 4 on osx
-
- remove warnings
-
- add some more files
-
- remove clang warnings
-
- build rr support libraries
-
- updated to libsbml 5.14
-
- build all dependencies
-
- update libsbml c# bindings
-
- remove old sbml header files before building
-
- build combine archive lib
-
- need to retrieve sbml2tikz from github
-
NG modified a comment on ticket #57
Sorry, I am a bit confused. I have managed to launch one of the appilications but...
-
Sorry, I am a bit confused. I have managed to launch one of the appilications but...
-
Kevin Janes posted a comment on ticket #57
Running it through XQuartz seemed to fix the problem. Thanks! Kevin
-
I'm afraid I don't have a mac right now to try it myself. Back when we released that...
-
I am experiencing the same problem. I uninstalled MDK 4.2.3.4 and then MRE 2.10.5,...
-
I am experiencing the same problem. I uninstalled MDK 4.2.3.4 and then MRE 2.10.5,...
-
I used the latest verison of Mono at first. I downloaded and installed the 2.10.5...
-
Could you let me know what Mono version you have installed? I'm afraid the only version...
-
Cannot lauch SBW.
-
- more simplifications
-
- fix possible leaks
-
dcb created ticket #56
sbw-core/SBWCore/SignatureBoolean.cpp:125: bad delete ?
-
- fix broker rc, and copying of icon into cmake...
-
-
Broker
-
-
- recompiled with .net 2.0
-
- more cleanup
-
- more cleanup
-
- tag checkout as non-interactive
-
- update example models
-
- update to libsbml 5.11.4
-
- add drag&drop, level version converter usable...
-
1 committed [r572]
- fix open celldesigner on osx
-
- std::atexit is not in std on some systems, mo...
-
- update C# bindings
-
- sorted memory issues by freeing static instan...
-
-
-
- update broker version automatically
-
- updated copyright statements
-
And indeed, that was the case in the original 2001 version ... those will need to...
-
Okay. I spoke of LGPLv2 because indicated in most source code files.
-
I've added the CMAKE_INSTALL_LIBDIR variable to the cmake scripts and ensured that...
-
thanks a license file (BSD) has been added to the source code archive.
-
-
-
- added a CMAKE_INSTALL_LIBDIR variable, so tha...
-
- added license file
-
[libSBW-2.10.0] undefined reference to 'xml*'
-
LICENSE file
-
INSTALL LIBDIR definition
-
in any case with the latest commit I've added error messages >in case the LIBXML_LIBRARY...
-
in any case with the latest commit I've added error messages in case the >LIBXML_LIBRARY...
-
- update to latest libSBML
-
Could you please also attach the CMakeCache.txt from the build directory. I need...
-
- add summary information
-
- fix typo
-
- throw error in case xml2 can't be found