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#3 Is it possible to add multiple abundance information files

1.0
open
nobody
None
2017-02-07
2017-02-06
John
No

Can Mycc utilize abundance information form several samples (e.g. multiple samples of the same habitat over time), like e.g. Metabat or Maxbin can do?
If yes, how do you give Mycc multiple datasets (the argument -a only seems to accept a single abundance file and none of your examples uses multiple abundance information).

Discussion

  • OliverLin

    OliverLin - 2017-02-07

    Please prepare an abundance file containing the following information.
    ContigName depth1 depth2 depth3 ...

    One example can be found in https://sourceforge.net/projects/sb2nhri/files/MyCC/Data/Sharon.zip/

    Thank you

     
  • John

    John - 2017-02-07

    ah, thanks!

     

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