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From: Dan H. <dh...@ds...> - 2016-05-03 18:29:26
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I am installing samtools 1-3-1, the newest version released last week and trying to compile it on Centos (redhat) 6.7 I did ./configure ... and make configure: creating ./config.status config.status: creating config.mk config.status: creating config.h [root@blade5-2-1 samtools-1.3.1]# make and got this error and the installation quit. I checked and verified that I installed ncurses and devel-ncurses as seen at the bottom. google did not indicate any known errors of the first ban_tview_curses error..the other errrors indicated no ncurses devel-ncurses libraries but they are installed. Any suggestions? gcc -g -O2 -I. -Ihtslib-1.3.1 -c -o bam_tview.o bam_tview.c gcc -g -O2 -I. -Ihtslib-1.3.1 -c -o bam_tview_curses.o bam_tview_curses.c bam_tview_curses.c:46:5: error: unknown type name ‘WINDOW’ bam_tview_curses.c: In function ‘curses_init_colors’: bam_tview_curses.c:107:22: error: ‘COLOR_WHITE’ undeclared (first use in this function) bam_tview_curses.c:107:22: note: each undeclared identifier is reported only once for each function it appears in bam_tview_curses.c:107:35: error: ‘COLOR_BLUE’ undeclared (first use in this function) bam_tview_curses.c:108:22: error: ‘COLOR_BLACK’ undeclared (first use in this function) bam_tview_curses.c:108:35: error: ‘COLOR_GREEN’ undeclared (first use in this function) bam_tview_curses.c:109:35: error: ‘COLOR_YELLOW’ undeclared (first use in this function) bam_tview_curses.c:112:35: error: ‘COLOR_CYAN’ undeclared (first use in this function) bam_tview_curses.c:113:35: error: ‘COLOR_MAGENTA’ undeclared (first use in this function) bam_tview_curses.c:114:35: error: ‘COLOR_RED’ undeclared (first use in this function) bam_tview_curses.c: In function ‘tv_win_goto’: bam_tview_curses.c:154:18: error: ‘KEY_BACKSPACE’ undeclared (first use in this function) bam_tview_curses.c:156:25: error: ‘KEY_ENTER’ undeclared (first use in this function) bam_tview_curses.c: In function ‘tv_win_help’: bam_tview_curses.c:203:5: error: unknown type name ‘WINDOW’ bam_tview_curses.c: In function ‘curses_underline’: bam_tview_curses.c:239:12: error: ‘A_UNDERLINE’ undeclared (first use in this function) bam_tview_curses.c: In function ‘curses_loop’: bam_tview_curses.c:263:18: error: ‘KEY_LEFT’ undeclared (first use in this function) bam_tview_curses.c:265:18: error: ‘KEY_RIGHT’ undeclared (first use in this function) bam_tview_curses.c:267:18: error: ‘KEY_SLEFT’ undeclared (first use in this function) bam_tview_curses.c:269:18: error: ‘KEY_SRIGHT’ undeclared (first use in this function) bam_tview_curses.c:278:18: error: ‘KEY_UP’ undeclared (first use in this function) bam_tview_curses.c:280:18: error: ‘KEY_DOWN’ undeclared (first use in this function) bam_tview_curses.c:282:18: error: ‘KEY_BACKSPACE’ undeclared (first use in this function) bam_tview_curses.c:284:18: error: ‘KEY_RESIZE’ undeclared (first use in this function) bam_tview_curses.c:284:39: error: ‘stdscr’ undeclared (first use in this function) bam_tview_curses.c: In function ‘curses_tv_init’: bam_tview_curses.c:325:12: error: ‘stdscr’ undeclared (first use in this function) bam_tview_curses.c:325:20: error: ‘TRUE’ undeclared (first use in this function) bam_tview_curses.c:331:15: warning: assignment makes pointer from integer without a cast [enabled by default] bam_tview_curses.c:332:15: warning: assignment makes pointer from integer without a cast [enabled by default] make: *** [bam_tview_curses.o] Error 1 [root@blade5-2-1 samtools-1.3.1]# make install^C [root@blade5-2-1 samtools-1.3.1]# yum install ncurses ncurses-devel Loaded plugins: dellsysid, fastestmirror, security Setting up Install Process Determining fastest mirrors epel/metalink | 13 kB 00:00 * base: mirror.fdcservers.net * epel: mirror.compevo.com * extras: centos.mirror.lstn.net * rpmforge: mirror.team-cymru.org * updates: mirror.eboundhost.com base | 3.7 kB 00:00 dell-omsa-indep | 1.9 kB 00:00 dell-omsa-specific | 1.9 kB 00:00 epel | 4.3 kB 00:00 epel/primary_db | 5.9 MB 00:01 extras | 3.4 kB 00:00 rpmforge | 1.9 kB 00:00 testing-1.1-devtools-6 | 951 B 00:00 testing-devtools-2-centos-6 | 951 B 00:00 updates | 3.4 kB 00:00 updates/primary_db | 4.7 MB 00:00 Package ncurses-5.7-4.20090207.el6.x86_64 already installed and latest version Package ncurses-devel-5.7-4.20090207.el6.x86_64 already installed and latest version Nothing to do |