[Samtools-help] Picard error - IlluminaBasecallsToSam

[Yoon S. P. <yp...@sc...>]

Hi,

In order to do multiple barcode demultiplexing, we have used Picard tool.
So far it have had wonderful job but today I got rare error.

I got several errors similar to below.
What are these errors? Any solution to avoid this?

ERROR	2012-11-29 10:48:11	IlluminaBasecallsToSam	Exception in TileProcessor
net.sf.picard.PicardException: Expected tile 1112 of CycledIlluminaFileMap to contain [I@5492bbba cycles but 64 were found!Check to see if the following bcl exists: /home/MiSeq/112612_contentMap/121126_M00474_0050_A000000000-A0TLH/Data/Intensities/BaseCalls/L001/C64.1/s_1_1112.bcl
	at net.sf.picard.illumina.parser.CycleIlluminaFileMap.assertValid(CycleIlluminaFileMap.java:92)
	at net.sf.picard.illumina.parser.IlluminaDataProviderFactory.makeParser(IlluminaDataProviderFactory.java:300)
	at net.sf.picard.illumina.parser.IlluminaDataProviderFactory.makeDataProvider(IlluminaDataProviderFactory.java:191)
	at net.sf.picard.illumina.IlluminaBasecallsToSam$TileProcessor.run(IlluminaBasecallsToSam.java:665)
	at java.lang.Thread.run(Thread.java:679)

Thanks,
Yoon