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From: Alec W. <al...@br...> - 2010-06-08 17:43:31
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Picard Release 1.22 8 June 2010 - In MetricsFile, fix bug in which comparator for Histogram was being lost when merging histogram keysets in printHistogram. - Fixed an infinite recursion bug in SequenceUtil.java. - Moved CigarUtilTest to Picard-public, and refactor. - Added a flush() to SamFileValidator when running in VERBOSE mode, to ensure each error is written to the output immediatley. - In CoordMath.java, modified and added a few methods to make them take ints instead of longs since we use ints everywhere. -Alec |