SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format.

The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools

Project Activity

See All Activity >

Categories

Bio-Informatics

License

BSD License, MIT License

Follow SAM tools

SAM tools Web Site

You Might Also Like
Automated quote and proposal software for IT solution providers. | ConnectWise CPQ Icon
Automated quote and proposal software for IT solution providers. | ConnectWise CPQ

Create IT quote templates, automate workflows, add integrations & price catalogs to save time & reduce errors on manual data entry & updates.

ConnectWise CPQ, formerly ConnectWise Sell, is a professional quote and proposal automation software for IT solution providers. ConnectWise CPQ offers a wide range of tools that enables IT solution providers to save time, quote more, and win big. Top features include professional quote or proposal templates, product catalog and sourcing, workflow automation, sales reporting, and integrations with best-in-breed solutions like Cisco, Dell, HP, and Salesforce.
Rate This Project
Login To Rate This Project

User Ratings

★★★★★
★★★★
★★★
★★
19
0
0
1
1
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 3 / 5

User Reviews

  • A core component of many a bioinformatics pipeline
  • Error: $./samtools: /lib64/libz.so.1: version `ZLIB_1.2.3.3' not found (required by ./samtools) How can I fix this problem? THX
  • Brilliant idea, code is not robust. Doesn't check return status of malloc, other libraries. One shouldn't have to use gdb to understand an expected error.
    1 user found this review helpful.
  • Nice, thank you
    1 user found this review helpful.
  • Wonderful project! Thanks for amazing work!
    2 users found this review helpful.
Read more reviews >

Additional Project Details

Operating Systems

Linux, BSD

Intended Audience

Science/Research, Developers

User Interface

Command-line, Curses/Ncurses

Programming Language

Perl, C

Related Categories

Perl Bio-Informatics Software, C Bio-Informatics Software

Registered

2008-11-25