Re: [rDock-list-def] Compilling rDock_2013_1 on a cluster

[Szilveszter J. <szi...@gm...>]

Hi, it is just hundred times easier to use a job-scheduler like Condor
/ LSF / GridEngine instead of implementing the MPI stuff into rDock.
If you have a cluster, you can have Condor for free, it is relatively
easy to install/use.

Cheers:
Szilva

On Wed, Apr 30, 2014 at 10:10 AM, Jose Manuel Gally
<jos...@un...> wrote:
> Hi!
>
> I would like to know if it's possible to compile a mpi version of rDock in
> order to run it on a cluster?
> If so could someone explain to me how to do it or redirect me to the
> relevant documentation?
>
> I couldn't find any mpi flag in the make files, or any documentation about
> parallel installation in the pdf guides in $RBT_ROOT/docs.
>
> Complementary informations :
> - The openmpi version on the cluster is 1.6.5 (x64).
> - I am not an expert in unix environment.
> - I have the rDock_2013_1 version.
> - I am running on Centos 6.5 x64.
> - I could compile rDock without any apparent problem on my local computer
> following the Getting_Started guide.
>
> Thank you for your help!
>
> Best regards,
> Jose Manuel
>
>
> -
>
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