Somehow PeakScanner seems to have a problem with one particular dataset I'm trying to process.
I exported a combined table as .txt file from GeneMapper and tried loading it in RawGeno, but it says:
Areas and Widths of AFLP peaks are absent: scoring can be processed,
but vizualisation of binning will be impossible.
You can correct this by tuning export options in PeakScanner.
Error in [.data.frame(all.dat, , 2) : nicht definierte Spalten gewählt (translation: unidentified column chosen)
What can I do to make the output fit into RawGeno? By the way: I can't score the data.
Thanks!
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Somehow PeakScanner seems to have a problem with one particular dataset I'm trying to process.
I exported a combined table as .txt file from GeneMapper and tried loading it in RawGeno, but it says:
Areas and Widths of AFLP peaks are absent: scoring can be processed,
but vizualisation of binning will be impossible.
You can correct this by tuning export options in PeakScanner.
Error in
[.data.frame(all.dat, , 2) : nicht definierte Spalten gewählt (translation: unidentified column chosen)What can I do to make the output fit into RawGeno? By the way: I can't score the data.
Thanks!
Hi Kathrin,
You seem to have hit on something new... Could you send me the faulty dataset at nils.arigo@gmail.com
Best,
Nils