[PyMOL] using morph where only one state contains a small molecule

[Kuhn, Claus-D. <ku...@cs...>]

Hi everyone,

I am trying to use the new morph command with incentive Pymol 1.6. The 2 states I am morphing between show an enzyme, which closes its active site over an incoming small molecule, meaning, the small molecule is only present in the second structure.
How can I get Pymol to display the small molecule during morphing? 
I always receive an error message where Pymol tells me that it couldnt recognize the small molecule. Is there a way I can load a library into Pymol as can be easily done in Coot?

Thanks for any advice,


Claus

Cold Spring Harbor Laboratory
Cold Spring Harbor, NY, USA