Re: [PyMOL] How to install g_mdmat from Gromacs package into PyMOL

[Tsjerk W. <ts...@gm...>]

Hi Suheila,

That is really not straightforward under Windows. To run any Gromacs
tools under Windows, the preferred way to install is using Cygwin. But
that will pose a problem coupling to Pymol. I'd say you're out of
luck, sorry.

Cheers,

Tsjerk


On Wed, Mar 7, 2012 at 4:15 PM, Suhaila Haji Mohd Hussin
<bel...@ho...> wrote:
> Hey everyone!
>
> If you go to this link below:
>
> http://www.pymolwiki.org/index.php/Contact_map_visualizer
>
> Under 'Generate Contact Map', it says that I need g_mdmat first from Gromacs
> package.
>
> I already downloaded gromacs-4.5.5.tar.gz assuming g_mdmat should be in
> there and just unzipped it.
>
> The problem is I don't know how to install gromacs-4.5.5 onto PyMOL
> directory? Please help.
>
> P/S: My PyMOL is running on Windows 7 and My python is 2.7.
>
> Cheers,
> Suhaila.
>
> ------------------------------------------------------------------------------
> Virtualization & Cloud Management Using Capacity Planning
> Cloud computing makes use of virtualization - but cloud computing
> also focuses on allowing computing to be delivered as a service.
> http://www.accelacomm.com/jaw/sfnl/114/51521223/
> _______________________________________________
> PyMOL-users mailing list (PyM...@li...)
> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> Archives: http://www.mail-archive.com/pym...@li...



-- 
Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Molecular Dynamics Group
* Groningen Institute for Biomolecular Research and Biotechnology
* Zernike Institute for Advanced Materials
University of Groningen
The Netherlands