Re: [PyMOL] pipe structure to pymol

[Jason V. <jas...@sc...>]

Nat,

Thanks for this -- it's always good to expand the PyMOLWiki to new
applications for PyMOL.

Cheers,

-- Jason

On Mon, Jan 23, 2012 at 2:08 PM, Nat Echols <nat...@gm...> wrote:
> On Mon, Jan 23, 2012 at 12:42 PM, Simon Becker
> <sim...@un...> wrote:
>> I would like to visualize the intermediate structures my program
>> produces during the computation cycle. Every iteration it generates a
>> new structure. Is there a way to display this structure in pymol, using
>> e.g. a pipe? Does anyone have experience with this, is there even a
>> tutorial or manual entry that I failed to find?
>
> Okay, I have added a couple of wiki pages:
>
> http://www.pymolwiki.org/index.php/Monitor_file_continuously
> http://www.pymolwiki.org/index.php/XML-RPC_server
>
> The second method is much more complex (and easy to break if the
> networking does not behave), but far more powerful.
>
> -Nat
>
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-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

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