From: lina <lin...@gm...> - 2011-10-26 04:54:03
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On Wednesday 26,October,2011 12:55 AM, Jason Vertrees wrote: > Hi Lina, > > 1] do I need generate the map from ccp4 > > (I have already installed the ccp4i, but seems not easy to know how > to get the map) > > > The CCP4 file is a map. Once the map is loaded into PyMOL you can > choose how you want to represent the data: isomesh, isosurface, slice, > gradient, or the new volumes. To make a new representation for the map > choose one of those from the "A" (Action) button. > > 2] For small molecular (ligand), the ccp4 is the best way to obtain > its electron density map? > > > PyMOL natively reads these maps, so you don't need ccp4i or any > special plugins. At present I have problem created the map. Thanks, > > Cheers, > > -- Jason > > > -- > Jason Vertrees, PhD > PyMOL Product Manager > Schrodinger, LLC > > (e) Jas...@sc... <mailto:Jas...@sc...> > (o) +1 (603) 374-7120 |