From: Warren D. <wa...@de...> - 2005-05-14 01:06:07
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Rebecca, Open up the PDB file into a text editor and insert a HEADER line at the start of each structure. =20 HEADER object-name PyMOL will then load each structure into a different object with the specified name. (HEADER must be all caps and located right at the beginning of the = line). Cheers, Warren -- Warren L. DeLano, Ph.D. =20 Principal Scientist . DeLano Scientific LLC =20 . 400 Oyster Point Blvd., Suite 213 =20 . South San Francisco, CA 94080 USA =20 . Biz:(650)-872-0942 Tech:(650)-872-0834 =20 . Fax:(650)-872-0273 Cell:(650)-346-1154 . mailto:wa...@de... =20 =20 > -----Original Message----- > From: pym...@li...=20 > [mailto:pym...@li...] On Behalf Of=20 > Page, Rebecca > Sent: Friday, May 13, 2005 3:26 PM > To: pym...@li... > Subject: [PyMOL] Atom Display problems >=20 > Pymol Users: > =20 > I have three superimposed proteins in a single pdb file; each=20 > protein has a different chain ID. > I want to display residue sidechains from all three proteins=20 > simultaneously, but I can't seem to prevent pymol from=20 > drawing bonds between different chain ID's atoms, so it ends=20 > up looking like a jumbled mess. > =20 > What is the easiest way to get around this?=20 > Is there a command I am unaware of?=20 > Or is my only solution to read them in as separate pdbfiles? > =20 > Thanks in advance for your help! > Rebecca=20 > =20 >=20 >=20 > ------------------------------------------------------- > This SF.Net email is sponsored by Oracle Space Sweepstakes=20 > Want to be the first software developer in space? > Enter now for the Oracle Space Sweepstakes! > http://ads.osdn.com/?ad_ids93&alloc_id=16281&op=3Dick > _______________________________________________ > PyMOL-users mailing list > PyM...@li... > https://lists.sourceforge.net/lists/listinfo/pymol-users >=20 |